RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 GCGRP47871 477 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 PNLIPRP1P54315 467 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 DNASE1L3Q13609 305 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 ARHGAP19Q14CB8 494 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 SF1Q15637 639 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 ATP1A1-AS1Q5TC04 95 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 HECTD2Q5U5R9 776 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 UGT3A1Q6NUS8 523 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 C8orf74Q6P047 294 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 FIGLAQ6QHK4 219 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 SUSD1Q6UWL2 747 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 TMEM207Q6UWW9 146 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 MBOAT1Q6ZNC8 495 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 STRA8Q7Z7C7 330 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 DSELQ8IZU8 1212 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 GPATCH11Q8N954 259 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 ZSCAN1Q8NBB4 408 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 PPFIBP2Q8ND30 876 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 PYROXD1Q8WU10 500 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 EXTL1Q92935 676 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 LINGO1Q96FE5 620 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 SEMA4CQ9C0C4 833 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 PHACTR1Q9C0D0 580 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 SYNPO2LQ9H987 977 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 ACTR5Q9H9F9 607 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 SLC6A20Q9NP91 592 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 SERTAD3Q9UJW9 196 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 IKZF3Q9UKT9 509 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 CORO1CQ9ULV4 474 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 PDE10AQ9Y233 779 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 VWA7Q9Y334 891 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 PCDHGA6Q9Y5G7 932 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 SCN3AQ9NY46 2000 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 DOCK10Q96BY6 2186 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 TNRC6AQ8NDV7 1962 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 TENM4Q6N022 2769 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 IGKV1-8A0A0C4DH67 115 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 TCRBV9S1A1TA0A576 114 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 OR2A25A4D2G3 310 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 E7ENX8 843 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 E7EQ34 232 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 MEN1O00255 615 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 MAP3K7O43318 606 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 C1QL1O75973 258 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 OR2B3O76000 313 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 FKBP9O95302 570 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 PRB1P04280 392 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 ITGB2P05107 769 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 FURINP09958 794 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 CCNYL3P0C7X3 344 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 PRKAR1AP10644 381 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 TCN2P20062 427 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 RPS18P62269 152 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 CAV1Q03135 178 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 TAP2Q03519 686 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 CDC20Q12834 499 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 LY6DQ14210 128 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF460Q14592 562 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 TBR1Q16650 682 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 PHKG1Q16816 387 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 ZXDCQ2QGD7 858 aaPredicted RBP10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 PTCHD3Q3KNS1 767 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 FAM45BPQ6NSW5 357 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 FAM198BQ6UWH4 519 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 UBE2R2Q712K3 238 aaPredicted RBP10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 SLC26A11Q86WA9 606 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 MMGT1Q8N4V1 131 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 RAB42Q8N4Z0 105 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 EXD3Q8N9H8 876 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 FAM45AQ8TCE6 357 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 SMPDL3AQ92484 453 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 CLIP3Q96DZ5 547 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF285Q96NJ3 590 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 EFHD1Q9BUP0 239 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 ACAT2Q9BWD1 397 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 CHST8Q9H2A9 424 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 ENAMQ9NRM1 1142 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 EURLQ9NYK6 297 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 DMGDHQ9UI17 866 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 PLCL2Q9UPR0 1127 aa10.55□□□□□ -0.72
SHKBP1-206ENST00000595523 BAHCC1Q9P281 2608 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 FAM95CA0A1B0GW59 222 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 FAM159BA6NKW6 160 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 TARM1B6A8C7 271 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 C21orf140B9A014 251 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 ZSCAN9O15535 394 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 ZBTB14O43829 449 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 SYF2O95926 243 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF37AP17032 561 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 ITGAXP20702 1163 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 MAGEA4P43358 317 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 RGS4P49798 205 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 TAS2R39P59534 338 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 NFKB2Q00653 900 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 GUCY2DQ02846 1103 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 SP140Q13342 867 aa10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-206ENST00000595523 CRTC2Q53ET0 693 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms