RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 S1PR4O95977 384 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 ALBP02768 609 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 CD9P21926 228 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 MCM3P25205 808 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 KCNJ1P48048 391 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 GRM7Q14831 915 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 TMED2Q15363 201 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 SF1Q15637 639 aaKnown RBP14.12□□□□□ -0.15
PNKP-202ENST00000593706 KCTD19Q17RG1 926 aaPredicted RBP14.12□□□□□ -0.15
PNKP-202ENST00000593706 ZC3H12BQ5HYM0 836 aaKnown RBP14.12□□□□□ -0.15
PNKP-202ENST00000593706 TCTE1Q5JU00 501 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 TSTD2Q5T7W7 516 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 TTC27Q6P3X3 843 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 PPP1R21Q6ZMI0 780 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 COX15Q7KZN9 410 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 KCNMB4Q86W47 210 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 PARP9Q8IXQ6 854 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 LMNTD1Q8N9Z9 388 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 GRHL3Q8TE85 626 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.12□□□□□ -0.15
PNKP-202ENST00000593706 ASZ1Q8WWH4 475 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 PEX13Q92968 403 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 HDAC10Q969S8 669 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 IL17FQ96PD4 163 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 SPSB2Q99619 263 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 SELENOSQ9BQE4 189 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 LHPPQ9H008 270 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 SLC39A10Q9ULF5 831 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 OSGIN2Q9Y236 505 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 JRKLQ9Y4A0 524 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 TCAF1Q9Y4C2 921 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 HS3ST3B1Q9Y662 390 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 DCHS2Q6V1P9 2916 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 OTOGQ6ZRI0 2925 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 CELSR1Q9NYQ6 3014 aa14.12□□□□□ -0.15
PNKP-202ENST00000593706 E7EVH7 732 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 GOT2P00505 430 aaKnown RBP14.11□□□□□ -0.15
PNKP-202ENST00000593706 APOA4P06727 396 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 EDN3P14138 238 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 ADRA1DP25100 572 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 PPARGP37231 505 aaPredicted RBP14.11□□□□□ -0.15
PNKP-202ENST00000593706 GRIA3P42263 894 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 MAGEA6P43360 314 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 TSFMP43897 325 aaKnown RBP14.11□□□□□ -0.15
PNKP-202ENST00000593706 GCGRP47871 477 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 PRAMEP78395 509 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 CYP1B1Q16678 543 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 FASTKD1Q53R41 847 aaKnown RBP14.11□□□□□ -0.15
PNKP-202ENST00000593706 YOD1Q5VVQ6 348 aaPredicted RBP14.11□□□□□ -0.15
PNKP-202ENST00000593706 B3GNTL1Q67FW5 361 aaPredicted RBP14.11□□□□□ -0.15
PNKP-202ENST00000593706 TTC23LQ6PF05 361 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 FIGLAQ6QHK4 219 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 FAM180AQ6UWF9 173 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 UNC5DQ6UXZ4 953 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 C4orf22Q6V702 233 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 VRK3Q8IV63 474 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 OR6P1Q8NGX9 317 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 OR2L8Q8NGY9 312 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 GSDMBQ8TAX9 411 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 THOC3Q96J01 351 aaKnown RBP14.11□□□□□ -0.15
PNKP-202ENST00000593706 PDLIM2Q96JY6 352 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 CRB3Q9BUF7 120 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 RAB11FIP5Q9BXF6 653 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 SLC26A1Q9H2B4 701 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 SEMA3GQ9NS98 782 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 TREX1Q9NSU2 369 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 NEU2Q9Y3R4 380 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 FAM169AQ9Y6X4 670 aa14.11□□□□□ -0.15
PNKP-202ENST00000593706 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.1□□□□□ -0.15
PNKP-202ENST00000593706 E2F3O00716 465 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 RASGRF2O14827 1237 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 UQCRHP07919 91 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 TNFRSF8P28908 595 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 CCR7P32248 378 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 OR1D4P47884 311 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 VSX2P58304 361 aaPredicted RBP14.1□□□□□ -0.15
PNKP-202ENST00000593706 SEMA3AQ14563 771 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 KCNJ11Q14654 390 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 NAA30Q147X3 362 aaPredicted RBP14.1□□□□□ -0.15
PNKP-202ENST00000593706 TLR1Q15399 786 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 FCRL6Q6DN72 434 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 KIRREL2Q6UWL6 708 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 IGFL2Q6UWQ7 119 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 LINC00696Q6ZRV3 163 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 NLRP9Q7RTR0 991 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 TICAM1Q8IUC6 712 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 RAB42Q8N4Z0 105 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 OR4L1Q8NH43 312 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 LKAAEAR1Q8TD35 194 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 SKA2Q8WVK7 121 aaPredicted RBP14.1□□□□□ -0.15
PNKP-202ENST00000593706 FAR1Q8WVX9 515 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 MS4A14Q96JA4 679 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 MENTQ9BUN1 341 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 HOMER3Q9NSC5 361 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 ANAPC5Q9UJX4 755 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 MAU2Q9Y6X3 613 aa14.1□□□□□ -0.15
PNKP-202ENST00000593706 CACNA1CQ13936 2221 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 TCRBV7S3A2A0A539 114 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 IQCF5A8MTL0 148 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 MAP2K7O14733 419 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms