RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 DDX28Q9NUL7 540 aaKnown RBP3.36□□□□□ -1.87
VMP1-212ENST00000591782 TMEM30AQ9NV96 361 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.36□□□□□ -1.87
VMP1-212ENST00000591782 CRNNQ9UBG3 495 aaPredicted RBP3.36□□□□□ -1.87
VMP1-212ENST00000591782 EXTL2Q9UBQ6 330 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 TRIM10Q9UDY6 481 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 CHORDC1Q9UHD1 332 aaPredicted RBP3.36□□□□□ -1.87
VMP1-212ENST00000591782 FBXW11Q9UKB1 542 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 RALYQ9UKM9 306 aaKnown RBP3.36□□□□□ -1.87
VMP1-212ENST00000591782 EXOC6BQ9Y2D4 811 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 OR2W1Q9Y3N9 320 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 PCDHAC2Q9Y5I4 1007 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 FADS3Q9Y5Q0 445 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 SESN1Q9Y6P5 492 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 PLEKHH1Q9ULM0 1364 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 NPATQ14207 1427 aa3.36□□□□□ -1.87
VMP1-212ENST00000591782 KANSL1LA0AUZ9 987 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 EME2A4GXA9 379 aaPredicted RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 HTR3EA5X5Y0 456 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8IPA6NC78 632 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 LILRA5A6NI73 299 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 IFITM10A6NMD0 228 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8JA6NMD2 632 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 EIF4E1BA6NMX2 242 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 GPR89AB7ZAQ6 455 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8KD6RF30 607 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 FAM90A26D6RGX4 464 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PTGES3LE9PB15 166 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 H0YCG3 227 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8TH3BQL2 631 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 H3BQV1 296 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 HS3ST1O14792 307 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PSMA7O14818 248 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 XPO1O14980 1071 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 ANKRD28O15084 1053 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 KMOO15229 486 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 NIPSNAP2O75323 286 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CAMTA2O94983 1202 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 LCA5LO95447 670 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 HEXBP07686 556 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GPR89BP0CG08 455 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8HP0CJ92 632 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CLUP10909 449 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PDHBP11177 359 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 HPGDP15428 266 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PRLRP16471 622 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 VCLP18206 1134 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GABRB1P18505 474 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 ANXA7P20073 488 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 CDH3P22223 829 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PRKACBP22694 351 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 JAK1P23458 1154 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 EEF1DP29692 281 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 HMOX2P30519 316 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 AXLP30530 894 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 ALDH3A1P30838 453 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 LMAN1P49257 510 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 TUFMP49411 452 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 CAMPP49913 170 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CDH8P55286 799 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CCNA1P78396 465 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GSTO1P78417 241 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 COG7P83436 770 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 ARF5P84085 180 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 IL1RL1Q01638 556 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 LGALS3BPQ08380 585 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 SREBF2Q12772 1141 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 IDI1Q13907 227 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 GIT2Q14161 759 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 NCF4Q15080 339 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 SHROOM1Q2M3G4 852 aaPredicted RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 WSCD2Q2TBF2 565 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 LRIT3Q3SXY7 679 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 ZNF718Q3SXZ3 478 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 ZNF672Q499Z4 452 aaPredicted RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 KRTCAP3Q53RY4 240 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 FAM76BQ5HYJ3 339 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 NSUN5P2Q63ZY6 315 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 TMEM198Q66K66 360 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 SPECC1LQ69YQ0 1117 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PDPK2PQ6A1A2 396 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 WBP2NLQ6ICG8 309 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 OR7E24Q6IFN5 339 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 RAB12Q6IQ22 244 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 LCN10Q6JVE6 187 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 TRNP1Q6NT89 227 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 NEPROQ6NW34 567 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 PAPD4Q6PIY7 484 aaKnown RBP3.35□□□□□ -1.87
VMP1-212ENST00000591782 LRRC31Q6UY01 552 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 RAD9BQ6WBX8 426 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CFAP77Q6ZQR2 320 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 STXBP4Q6ZWJ1 553 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 CHST9Q7L1S5 443 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 KRT74Q7RTS7 529 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 KMT5CQ86Y97 462 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 TICAM1Q8IUC6 712 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 NAGSQ8N159 534 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 NUP93Q8N1F7 819 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 KBTBD3Q8NAB2 608 aa3.35□□□□□ -1.87
VMP1-212ENST00000591782 POC1AQ8NBT0 407 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms