RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TRIP13Q15645 432 aaPredicted RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 CCNG2Q16589 344 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 DEFB110Q30KQ9 67 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 SYTL3Q4VX76 610 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 PRR30Q53SZ7 412 aaPredicted RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 C1orf189Q5VU69 101 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 YOD1Q5VVQ6 348 aaPredicted RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 UNC5DQ6UXZ4 953 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 OVCH1Q7RTY7 1134 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 PPP1R32Q7Z5V6 425 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 VRK3Q8IV63 474 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 MCATQ8IVS2 390 aaKnown RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 GALNT16Q8N428 558 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 CLEC1AQ8NC01 280 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 OR6P1Q8NGX9 317 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 OR2L8Q8NGY9 312 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 ZUFSPQ96AP4 578 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 FKBP10Q96AY3 582 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 SNRNP40Q96DI7 357 aaKnown RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 CAPZA3Q96KX2 299 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 ZNF285Q96NJ3 590 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 TSSK1BQ9BXA7 367 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 SLC29A3Q9BZD2 475 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 SLC26A1Q9H2B4 701 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 WDR54Q9H977 334 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 TXLNGQ9NUQ3 528 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 PLEKHB1Q9UF11 243 aaPredicted RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 NDOR1Q9UHB4 597 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 KLK4Q9Y5K2 254 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 HIVEP3Q5T1R4 2406 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 UTP20O75691 2785 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 IQCF5A8MTL0 148 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 AGPSO00116 658 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 PGRMC1O00264 195 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 PRMT5O14744 637 aaPredicted RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 CBX6O95503 412 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 APOA4P06727 396 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 MAGP20916 626 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 MMP11P24347 488 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 RPL22P35268 128 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 PRAMEP78395 509 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 AIMP2Q13155 320 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 EIF2S3LQ2VIR3 472 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 FASTKD1Q53R41 847 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 ZC3H12BQ5HYM0 836 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 AARS2Q5JTZ9 985 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 PCID2Q5JVF3 399 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 RNFT1Q5M7Z0 435 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 DRICH1Q6PGQ1 229 aaPredicted RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 FIGLAQ6QHK4 219 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 PPP1R21Q6ZMI0 780 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 Q6ZS92 163 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 DCUN1D3Q8IWE4 304 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 FAM20CQ8IXL6 584 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 IQCKQ8N0W5 287 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 PRELID2Q8N945 189 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 HMGCLL1Q8TB92 370 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 DLG3Q92796 817 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 MAGOHBQ96A72 148 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 C19orf60Q96EN9 201 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 CHRAC1Q9NRG0 131 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 RAB6BQ9NRW1 208 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 INTS7Q9NVH2 962 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 IL1RAPL1Q9NZN1 696 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 LUZP4Q9P127 313 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 PLAGL1Q9UM63 463 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 SNX12Q9UMY4 172 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 DRG1Q9Y295 367 aaKnown RBP9.98□□□□□ -0.81
VPS4B-207ENST00000591519 TCAF1Q9Y4C2 921 aa9.98□□□□□ -0.81
VPS4B-207ENST00000591519 A0A1B0GX78 115 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 FITM1A5D6W6 292 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 RASGRF2O14827 1237 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 KPNA5O15131 536 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 SRPX2O60687 465 aaPredicted RBP9.97□□□□□ -0.81
VPS4B-207ENST00000591519 ITGAXP20702 1163 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 ALAS2P22557 587 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 RPS3P23396 243 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS4B-207ENST00000591519 NPY2RP49146 381 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 TTPAP49638 278 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 BASP1P80723 227 aaKnown RBP9.97□□□□□ -0.81
VPS4B-207ENST00000591519 RELBQ01201 579 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 MRPL49Q13405 166 aaKnown RBP9.97□□□□□ -0.81
VPS4B-207ENST00000591519 RAPSNQ13702 412 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 GRM7Q14831 915 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 NR6A1Q15406 480 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 NKG7Q16617 165 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 FAM214AQ32MH5 1076 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 TCTE1Q5JU00 501 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 FCRL6Q6DN72 434 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 TTC27Q6P3X3 843 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 IGFL2Q6UWQ7 119 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 C4orf22Q6V702 233 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 TTLL10Q6ZVT0 673 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 LRRC6Q86X45 466 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 TMEM151BQ8IW70 566 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 MPP5Q8N3R9 675 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 RASGEF1CQ8N431 466 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 ZADH2Q8N4Q0 377 aa9.97□□□□□ -0.81
VPS4B-207ENST00000591519 CISD2Q8N5K1 135 aaKnown RBP9.97□□□□□ -0.81
VPS4B-207ENST00000591519 LMNTD1Q8N9Z9 388 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms