RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ATG10Q9H0Y0 220 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 C12orf65Q9H3J6 166 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 XKR8Q9H6D3 395 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 INTS9Q9NV88 658 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 INTS7Q9NVH2 962 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 CIDEBQ9UHD4 219 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 DYRK1BQ9Y463 629 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 ANGPTL3Q9Y5C1 460 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 PCDHGA1Q9Y5H4 931 aa16.4■□□□□ 0.22
SCAMP4-211ENST00000588907 ZFHX2Q9C0A1 2572 aaPredicted RBP16.39■□□□□ 0.22
SCAMP4-211ENST00000588907 GSAPA4D1B5 854 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 CCNT2O60583 730 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 MLYCDO95822 493 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 CHN1P15882 459 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 GNAZP19086 355 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 CMPK1P30085 196 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 ALDH3A1P30838 453 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 CDC16Q13042 620 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 PDK4Q16654 411 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 SLC5A12Q1EHB4 618 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 ZNF678Q5SXM1 525 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 THOC6Q86W42 341 aaKnown RBP16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 ZNF761Q86XN6 746 aaPredicted RBP16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 KIRREL3Q8IZU9 778 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 LMNTD1Q8N9Z9 388 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 MGARPQ8TDB4 240 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 TMEM237Q96Q45 408 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 ACTR10Q9NZ32 417 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 ANKMY1Q9P2S6 941 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 POMT2Q9UKY4 750 aa16.39■□□□□ 0.21
SCAMP4-211ENST00000588907 WDR87Q6ZQQ6 2873 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 KRT87PA6NCN2 255 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 ISM1B1AKI9 464 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 BTN3A3O00478 584 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 E2F3O00716 465 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 GIPC1O14908 333 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 TOX3O15405 576 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 NPHS1O60500 1241 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 SUPT7LO94864 414 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 CPNE6O95741 557 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 TYRP1P17643 537 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 POLR2CP19387 275 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 ACADVLP49748 655 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 WDR4P57081 412 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 OR1D5P58170 312 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 PRDX1Q06830 199 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 TSTA3Q13630 321 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 FASTKQ14296 549 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 SF1Q15637 639 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 ICE2Q659A1 982 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 ATG16L1Q676U5 607 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 SPESP1Q6UW49 350 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 C17orf64Q86WR6 236 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 PPFIBP2Q8ND30 876 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 RSC1A1Q92681 617 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 CNDP1Q96KN2 507 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 LRRN3Q9H3W5 708 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 PCTPQ9UKL6 214 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 SLC22A14Q9Y267 594 aa16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 MN1Q10571 1320 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-211ENST00000588907 A0A0J9YY10 115 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 A0A1W2PPV9 198 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 TLCD2A6NGC4 264 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 TMEM114B3SHH9 223 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 CLGNO14967 610 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 MAP3K7O43318 606 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 B4GAT1O43505 415 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 PRICKLE3O43900 615 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 UGDHO60701 494 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 RFPL3O75679 317 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 SIX3O95343 332 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 OTCP00480 354 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 SERPINE1P05121 402 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 UGT2B7P16662 529 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 AGTR2P50052 363 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 NAGLUP54802 743 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 PCDH1Q08174 1060 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 GALNT1Q10472 559 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 LCP2Q13094 533 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 GTF2H2Q13888 395 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 PERM1Q5SV97 790 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 GTF2H2CQ6P1K8 395 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 SUSD1Q6UWL2 747 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 FRMD7Q6ZUT3 714 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 TAX1BP1Q86VP1 789 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 KIAA2013Q8IYS2 634 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 Q8N9G6 341 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 SNX31Q8N9S9 440 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 OR2L3Q8NG85 312 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 OR2A1Q8NGT9 310 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 ZNF483Q8TF39 744 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 JPH3Q8WXH2 748 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 NCSTNQ92542 709 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 PYCR2Q96C36 320 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 ABCG4Q9H172 646 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 EHD1Q9H4M9 534 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 EML4Q9HC35 981 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 MRPS30Q9NP92 439 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 C1GALT1Q9NS00 363 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 OGFRQ9NZT2 677 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms