RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CCDC177Q9NQR7 707 aaPredicted RBP18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 NUDT4Q9NZJ9 180 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 CD274Q9NZQ7 290 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 SEMA5BQ9P283 1151 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 TAC3Q9UHF0 121 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 HEATR5BQ9P2D3 2071 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 UQCRHLA0A096LP55 91 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 A0A0J9YY10 115 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 A0A1W2PNU3 283 aaPredicted RBP18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 PMS2P1A4D2B8 440 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 SLC9B1P1A6NJY1 282 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 TK2O00142 265 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 HGSO14964 777 aaPredicted RBP18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 UQCRHP07919 91 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 MTHFD2P13995 350 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 YBX1P67809 324 aaKnown RBP18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 SF1Q15637 639 aaKnown RBP18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 THEMIS2Q5TEJ8 643 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 PDPRQ8NCN5 879 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 OR56A3Q8NH54 315 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 KLHL6Q8WZ60 621 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 GRAMD1AQ96CP6 724 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 TRAPPC9Q96Q05 1148 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 TMEM79Q9BSE2 394 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 TMEM216Q9P0N5 145 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 KLHL20Q9Y2M5 609 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 PCDHB11Q9Y5F2 797 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 NCOR2Q9Y618 2525 aa18.29■□□□□ 0.52
CLPTM1-209ENST00000588855 CCDC187A0A096LP49 1063 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CCDC189A1A4V9 331 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 S100BP04271 92 aaPredicted RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 RBP1P09455 135 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 KRT4P19013 534 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CSTF2P33240 577 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 HNMTP50135 292 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 FBXO48Q5FWF7 155 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 C3orf38Q5JPI3 329 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 PRAMEF13Q5VWM6 474 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 KIAA1614Q5VZ46 1190 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 C16orf46Q6P387 395 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CARFQ8N187 725 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 OR2L3Q8NG85 312 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SLC41A2Q96JW4 573 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SGPP1Q9BX95 441 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 WWOXQ9NZC7 414 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 LOXL2Q9Y4K0 774 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CEP295Q9C0D2 2601 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 MED19A0JLT2 244 aaPredicted RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SYCE1LA8MT33 242 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 RGS16O15492 202 aaPredicted RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 TAPBPO15533 448 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 PRAMEF10O60809 474 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 GLRA3O75311 464 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 ZBTB11O95625 1053 aaPredicted RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 HGFP14210 728 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 MAGP20916 626 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SLC18A2Q05940 514 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 PTCHD3Q3KNS1 767 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CDKL4Q5MAI5 379 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 ICE2Q659A1 982 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SULT1C3Q6IMI6 304 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CAPN13Q6MZZ7 669 aaPredicted RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CDHR3Q6ZTQ4 885 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 RAB11FIP2Q7L804 512 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 LCA5Q86VQ0 697 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SRRM1Q8IYB3 904 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 TCAIMQ8N3R3 496 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 AGBL5Q8NDL9 886 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 ESAMQ96AP7 390 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CMKLR1Q99788 373 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 MRPL57Q9BQC6 102 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 MRPL46Q9H2W6 279 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SLC6A20Q9NP91 592 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 INTS7Q9NVH2 962 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 OCIAD1Q9NX40 245 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SOHLH2Q9NX45 425 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 CPSF2Q9P2I0 782 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SATB2Q9UPW6 733 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 SH2B3Q9UQQ2 575 aa18.28■□□□□ 0.52
CLPTM1-209ENST00000588855 GSTA1P08263 222 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 SBK3P0C264 359 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 NELFEP18615 380 aaKnown RBP18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 CCND1P24385 295 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 CMPK1P30085 196 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 SLC6A12P48065 614 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 SH3BP2P78314 561 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 CAMK2BQ13554 666 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 KCNAB1Q14722 419 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 ZIC1Q15915 447 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 FAM129CQ86XR2 697 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 KMT5CQ86Y97 462 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 TMEM151AQ8N4L1 468 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 C19orf47Q8N9M1 422 aaKnown RBP18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 WDR36Q8NI36 951 aaKnown RBP18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 OR4K3Q96R72 315 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 CENPHQ9H3R5 247 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 SIDT1Q9NXL6 827 aaKnown RBP18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 AKAP7Q9P0M2 348 aaPredicted RBP18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 DCDC2Q9UHG0 476 aa18.27■□□□□ 0.51
CLPTM1-209ENST00000588855 PTBP2Q9UKA9 531 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms