RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 MYO1CO00159 1063 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 RAB40ALP0C0E4 278 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 MPC1LP0DKB6 136 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 ITGA1P56199 1179 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 ARL4CP56559 192 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 MRPS25P82663 173 aaKnown RBP17.15■□□□□ 0.34
ERBB2-221ENST00000584888 CHAF1BQ13112 559 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 HIF1AQ16665 826 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 CPZQ66K79 652 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 FBXO15Q8NCQ5 510 aaPredicted RBP17.15■□□□□ 0.34
ERBB2-221ENST00000584888 OR9A1PQ8NGU1 263 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 MAGEC3Q8TD91 643 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 SKA2Q8WVK7 121 aaPredicted RBP17.15■□□□□ 0.34
ERBB2-221ENST00000584888 ASB11Q8WXH4 323 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 CERS2Q96G23 380 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 GPR21Q99679 349 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 NLNQ9BYT8 704 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 TRIM31Q9BZY9 425 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 CCDC68Q9H2F9 335 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 ACTR5Q9H9F9 607 aaPredicted RBP17.15■□□□□ 0.34
ERBB2-221ENST00000584888 ENAMQ9NRM1 1142 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 PCMTD2Q9NV79 361 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 SPATA7Q9P0W8 599 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 ZC3H7BQ9UGR2 993 aaKnown RBP17.15■□□□□ 0.34
ERBB2-221ENST00000584888 CHMP2BQ9UQN3 213 aa17.15■□□□□ 0.34
ERBB2-221ENST00000584888 CCDC88CQ9P219 2028 aa17.14■□□□□ 0.34
ERBB2-221ENST00000584888 ARGFXA6NJG6 315 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 EIF3FO00303 357 aaPredicted RBP17.14■□□□□ 0.33
ERBB2-221ENST00000584888 RAD51CO43502 376 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 CAPN1P07384 714 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 CTSBP07858 339 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 CBSLP0DN79 551 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 ENO3P13929 434 aaPredicted RBP17.14■□□□□ 0.33
ERBB2-221ENST00000584888 CYP2A7P20853 494 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 MAGP20916 626 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 CBSP35520 551 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 CARSP49589 748 aaKnown RBP17.14■□□□□ 0.33
ERBB2-221ENST00000584888 CCL11P51671 97 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 MLLT10P55197 1068 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 UBAP2LQ14157 1087 aaKnown RBP17.14■□□□□ 0.33
ERBB2-221ENST00000584888 TTLL9Q3SXZ7 439 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 HP1BP3Q5SSJ5 553 aaPredicted RBP17.14■□□□□ 0.33
ERBB2-221ENST00000584888 ZNF385CQ66K41 422 aaPredicted RBP17.14■□□□□ 0.33
ERBB2-221ENST00000584888 DUPD1Q68J44 220 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 FCRL6Q6DN72 434 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 TRMT10BQ6PF06 316 aaKnown RBP17.14■□□□□ 0.33
ERBB2-221ENST00000584888 MAATS1Q7Z4T9 603 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 ENDOVQ8N8Q3 282 aaKnown RBP17.14■□□□□ 0.33
ERBB2-221ENST00000584888 ADAMTS17Q8TE56 1095 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 MIB2Q96AX9 1013 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 ING2Q9H160 280 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 ACSS2Q9NR19 701 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 TCFL5Q9UL49 500 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 SNX7Q9UNH6 387 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 DOPEY2Q9Y3R5 2298 aa17.14■□□□□ 0.33
ERBB2-221ENST00000584888 PTPN13Q12923 2485 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 GCGRP47871 477 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 C2orf54Q08AI8 447 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 CUL1Q13616 776 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 FASTKQ14296 549 aaKnown RBP17.13■□□□□ 0.33
ERBB2-221ENST00000584888 ARHGAP19Q14CB8 494 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 FASTKD3Q14CZ7 662 aaKnown RBP17.13■□□□□ 0.33
ERBB2-221ENST00000584888 PTCHD3Q3KNS1 767 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 FAM69BQ5VUD6 431 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 FIGLAQ6QHK4 219 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 TAX1BP1Q86VP1 789 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 SYTL1Q8IYJ3 562 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 BBOF1Q8ND07 529 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 OR2A1Q8NGT9 310 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 GABPB2Q8TAK5 448 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-221ENST00000584888 ZUFSPQ96AP4 578 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 PKP4Q99569 1192 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 SLC25A23Q9BV35 468 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 SLC7A5P2Q9GIP4 190 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 SPRTNQ9H040 489 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-221ENST00000584888 MLXIPLQ9NP71 852 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 MOCS1Q9NZB8 636 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 GRHL1Q9NZI5 618 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 WHRNQ9P202 907 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 SLC17A6Q9P2U8 582 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 TSR3Q9UJK0 312 aaKnown RBP17.13■□□□□ 0.33
ERBB2-221ENST00000584888 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 KLHL20Q9Y2M5 609 aa17.13■□□□□ 0.33
ERBB2-221ENST00000584888 MED13Q9UHV7 2174 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 TARM1B6A8C7 271 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 E7EQ34 232 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 NDC80O14777 642 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 ZNF749O43361 778 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 CATP04040 527 aaKnown RBP17.12■□□□□ 0.33
ERBB2-221ENST00000584888 GRIA3P42263 894 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 SKIV2L2P42285 1042 aaKnown RBP17.12■□□□□ 0.33
ERBB2-221ENST00000584888 PGDP52209 483 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 CDKN2DP55273 166 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 SF1Q15637 639 aaKnown RBP17.12■□□□□ 0.33
ERBB2-221ENST00000584888 DEFB110Q30KQ9 67 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 RBM20Q5T481 1227 aaKnown RBP17.12■□□□□ 0.33
ERBB2-221ENST00000584888 FAM198BQ6UWH4 519 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 CFAP36Q96G28 342 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 ZNF285Q96NJ3 590 aa17.12■□□□□ 0.33
ERBB2-221ENST00000584888 FAM114A2Q9NRY5 505 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms