RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 FAM20CQ8IXL6 584 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 PALM2Q8IXS6 379 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ADGRF3Q8IZF5 1079 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 C2orf73Q8N5S3 287 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 OR4E2Q8NGC2 313 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 OR4D9Q8NGE8 314 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 OR10G6Q8NH81 332 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 OR5K2Q8NHB8 316 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 FBXO27Q8NI29 283 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 WDR48Q8TAF3 677 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 CALML6Q8TD86 181 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 DENND1AQ8TEH3 1009 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ASZ1Q8WWH4 475 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 KCNJ9Q92806 393 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 SH3KBP1Q96B97 665 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 PLPPR2Q96GM1 343 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 LIN37Q96GY3 246 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 CDC42EP4Q9H3Q1 356 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 GSX1Q9H4S2 264 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ANKZF1Q9H8Y5 726 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ASCL3Q9NQ33 180 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM114A2Q9NRY5 505 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ADAMTS6Q9UKP5 1117 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ASF1AQ9Y294 204 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 TDRKHQ9Y2W6 561 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 DHRS7Q9Y394 339 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 IGHV5-51A0A0C4DH38 117 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 HMX2A2RU54 273 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 ARHGEF33A8MVX0 844 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 E5RI56 91 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 IFRD1O00458 451 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 NDC80O14777 642 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 TLX3O43711 291 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 BRINP1O60477 761 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 WISP3O95389 354 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 C1orf105O95561 183 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 APOA4P06727 396 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 FGF3P11487 239 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 FDXRP22570 491 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 GATA4P43694 442 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 TAS2R39P59534 338 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 YBX1P67809 324 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 GABREP78334 506 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 COL9A2Q14055 689 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 MPP2Q14168 576 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 WIPI1Q5MNZ9 446 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 TEX35Q5T0J7 233 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 IRGCQ6NXR0 463 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 RAB11FIP2Q7L804 512 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 HDXQ7Z353 690 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 GALNT7Q86SF2 657 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 TRIM73Q86UV7 250 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 RBM12BQ8IXT5 1001 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 TBC1D21Q8IYX1 336 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 BMPERQ8N8U9 685 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 EEF1AKMT1Q8WVE0 214 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 ZCCHC14Q8WYQ9 949 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 AHCYL2Q96HN2 611 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 FANCD2OSQ96PS1 177 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 PANX3Q96QZ0 392 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 FMO2Q99518 471 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 TXLNGYQ9BZA5 131 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 EPB41L4BQ9H329 900 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 TFB2MQ9H5Q4 396 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 STN1Q9H668 368 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 MVB12BQ9H7P6 319 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 CAB39LQ9H9S4 337 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 APMAPQ9HDC9 416 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 HRASLS2Q9NWW9 162 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 SIDT1Q9NXL6 827 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 HIF3AQ9Y2N7 669 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 MTO1Q9Y2Z2 717 aaKnown RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 LOXL2Q9Y4K0 774 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 ACTL7BQ9Y614 415 aa9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 V9GYY5 206 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-219ENST00000576713 MGAQ8IWI9 3026 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 ANKRD11Q6UB99 2663 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 CCDC187A0A096LP49 1063 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM95CA0A1B0GW59 222 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 H3BMM5 538 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 HCRTR1O43613 425 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 NRP2O60462 931 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 PSIP1O75475 530 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 BPNT1O95861 308 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 PVRP15151 417 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 AMD1P17707 334 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 PKLRP30613 574 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 PPM1FP49593 454 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 SEPHS1P49903 392 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 FASTKQ14296 549 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 KRT33BQ14525 404 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 KCNAB1Q14722 419 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 TMED2Q15363 201 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 KIF26BQ2KJY2 2108 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 ZXDCQ2QGD7 858 aaPredicted RBP9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 UNC5DQ6UXZ4 953 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 CYS1Q717R9 158 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 TAX1BP1Q86VP1 789 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms