RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 KIR2DS3Q14952 304 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 ZSCAN26Q16670 478 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 KCTD19Q17RG1 926 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 PLEKHS1Q5SXH7 462 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 C1orf189Q5VU69 101 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 LCN10Q6JVE6 187 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 TCTN3Q6NUS6 607 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 CASC4Q6P4E1 433 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 FAM198BQ6UWH4 519 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 OTOAQ7RTW8 1153 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 VRK3Q8IV63 474 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 DCUN1D3Q8IWE4 304 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 SLC22A15Q8IZD6 547 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 C2orf73Q8N5S3 287 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 SERPINB12Q96P63 405 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 OR2A14Q96R47 310 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 SELENOSQ9BQE4 189 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 SLC25A23Q9BV35 468 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 NLNQ9BYT8 704 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 TRIM55Q9BYV6 548 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 PCMTD2Q9NV79 361 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 SYBUQ9NX95 663 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 SAMD15Q9P1V8 674 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 MARCH4Q9P2E8 410 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 TCFL5Q9UL49 500 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 G3BP2Q9UN86 482 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 NOVA2Q9UNW9 492 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 NEU2Q9Y3R4 380 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 NFS1Q9Y697 457 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 HEATR5BQ9P2D3 2071 aa9.32□□□□□ -0.92
NPLOC4-216ENST00000574344 EXOC1LA0A1B0GW35 172 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 TLDC2A0PJX2 215 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 GOLGA8TH3BQL2 631 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 ZSCAN9O15535 394 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 CDH16O75309 829 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 VAPBO95292 243 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 TPSB2P20231 275 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 MAGP20916 626 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 AOAHP28039 575 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 OTX2P32243 289 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 RORAP35398 523 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 CCL11P51671 97 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 PGDP52209 483 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 MAGOHP61326 146 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 SLC29A2Q14542 456 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 SLC9A5Q14940 896 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 NCF4Q15080 339 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 TPSAB1Q15661 275 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 SLC5A12Q1EHB4 618 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 ZNF789Q5FWF6 425 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 FAM69BQ5VUD6 431 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 MLIPQ5VWP3 458 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 MRNIPQ6NTE8 343 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 LRRC8BQ6P9F7 803 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 CNSTQ6PJW8 725 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 CES3Q6UWW8 571 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 UNC5DQ6UXZ4 953 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 ZNF517Q6ZMY9 492 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 SDCCAG8Q86SQ7 713 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 LRRC6Q86X45 466 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 RAB43Q86YS6 212 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 APLFQ8IW19 511 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 FAM20CQ8IXL6 584 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 PDIK1LQ8N165 341 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 MPP5Q8N3R9 675 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 RAB42Q8N4Z0 105 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 ZNF655Q8N720 491 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 SLC22A18Q96BI1 424 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 MFSD3Q96ES6 412 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 SGSM3Q96HU1 749 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 FOPNLQ96NB1 174 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 IL17FQ96PD4 163 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 C17orf62Q9BQA9 187 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 DPH2Q9BQC3 489 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 RAB11FIP5Q9BXF6 653 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 FAM107BQ9H098 131 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 ING2Q9H160 280 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 FAM60AQ9NP50 221 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 SAYSD1Q9NPB0 183 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 TREX1Q9NSU2 369 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 INTS7Q9NVH2 962 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 NINJ2Q9NZG7 142 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 NDOR1Q9UHB4 597 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 SRPK3Q9UPE1 567 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 AP1M2Q9Y6Q5 423 aa9.31□□□□□ -0.92
NPLOC4-216ENST00000574344 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 TCRBV7S3A2A0A539 114 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 E5RI56 91 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 K7EM74 188 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 KPNA5O15131 536 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 GPC4O75487 556 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 TMEM63AO94886 807 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 SHBGP04278 402 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 TPBGLP0DKB5 382 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 PAMP19021 973 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 CD9P21926 228 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 RPS3P23396 243 aaKnown RBP eCLIP9.3□□□□□ -0.924e-7■■■■□ 21.2
NPLOC4-216ENST00000574344 IVDP26440 423 aa9.3□□□□□ -0.92
NPLOC4-216ENST00000574344 PEBP1P30086 187 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms