RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CCL11P51671 97 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 EMP3P54852 163 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 RELAQ04206 551 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CHAF1BQ13112 559 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ATP1A4Q13733 1029 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 TTLL9Q3SXZ7 439 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 RNASEH2BQ5TBB1 312 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FAM69BQ5VUD6 431 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ZNF470Q6ECI4 717 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CNSTQ6PJW8 725 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 RNF44Q7L0R7 432 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FAM20CQ8IXL6 584 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PPIL6Q8IXY8 311 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 AGGF1Q8N302 714 aaeCLIP16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SLC35F6Q8N357 371 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 OR9A1PQ8NGU1 263 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SKA2Q8WVK7 121 aaPredicted RBP16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ZNF669Q96BR6 464 aaPredicted RBP16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FER1L6-AS2Q96M78 137 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SLC22A11Q9NSA0 550 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 C5AR2Q9P296 337 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SNX12Q9UMY4 172 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 G3BP2Q9UN86 482 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FAM169AQ9Y6X4 670 aa16.38■□□□□ 0.21
MAP1LC3B-208ENST00000570189 COL12A1Q99715 3063 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ARHGEF33A8MVX0 844 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 E5RI56 91 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CTSVO60911 334 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SORBS2O94875 1100 aaKnown RBP16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ENO3P13929 434 aaPredicted RBP16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CHRM3P20309 590 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 LONRF1Q17RB8 773 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 KLHL38Q2WGJ6 581 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FAM214AQ32MH5 1076 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ACSBG2Q5FVE4 666 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 C1orf189Q5VU69 101 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 MLIPQ5VWP3 458 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 OVCH1Q7RTY7 1134 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 TAX1BP1Q86VP1 789 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 C2orf73Q8N5S3 287 aaPredicted RBP16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FDCSPQ8NFU4 85 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SELENOSQ9BQE4 189 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 TRIM56Q9BRZ2 755 aaKnown RBP16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GRPEL1Q9HAV7 217 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CUTCQ9NTM9 273 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GALPQ9UBC7 116 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CIDEBQ9UHD4 219 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PCYOX1Q9UHG3 505 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 RUVBL2Q9Y230 463 aaKnown RBP16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 KLHL20Q9Y2M5 609 aa16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PTRH2Q9Y3E5 179 aaKnown RBP16.37■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ZNF839A8K0R7 811 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GFYI3L273 518 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 KIF5CO60282 957 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 DPM1O60762 260 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CATP04040 527 aaKnown RBP16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 UMODP07911 640 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 MPC1LP0DKB6 136 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PSMB5P28074 263 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 THOC5Q13769 683 aaKnown RBP16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 DCAF10Q5QP82 559 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ZNF549Q6P9A3 640 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 IGFL3Q6UXB1 125 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 TTLL10Q6ZVT0 673 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PPP1R32Q7Z5V6 425 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 DENND6AQ8IWF6 608 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 TTC29Q8NA56 475 aaPredicted RBP16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GIMAP7Q8NHV1 300 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SMPDL3AQ92484 453 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FAM167BQ9BTA0 163 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 NUDT9Q9BW91 350 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GPR83Q9NYM4 423 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 NXT1Q9UKK6 140 aaKnown RBP16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 DHRS7Q9Y394 339 aa16.36■□□□□ 0.21
MAP1LC3B-208ENST00000570189 DOPEY2Q9Y3R5 2298 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 LRRK2Q5S007 2527 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CTAGE9A4FU28 777 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 TTC4O95801 387 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 TCP1P17987 556 aaKnown RBP16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 MMP11P24347 488 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 CMPK1P30085 196 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SKIV2L2P42285 1042 aaKnown RBP16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SLC1A2P43004 574 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PTK6Q13882 451 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 KCTD19Q17RG1 926 aaPredicted RBP16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 VWA5B1Q5TIE3 1220 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 LRRC8EQ6NSJ5 796 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 COX15Q7KZN9 410 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 PCGF5Q86SE9 256 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 GALNT7Q86SF2 657 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ASB11Q8WXH4 323 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 SPSB2Q99619 263 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 MIPEPQ99797 713 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 ZFYVE21Q9BQ24 234 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 NAT9Q9BTE0 207 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 KCNF1Q9H3M0 494 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 IRAK4Q9NWZ3 460 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 P4HTMQ9NXG6 502 aa16.35■□□□□ 0.21
MAP1LC3B-208ENST00000570189 FBXO5Q9UKT4 447 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms