RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 FITM1A5D6W6 292 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 C3orf70A6NLC5 250 aaPredicted RBP15.39■□□□□ 0.05
CLK3-223ENST00000568488 FFAR3O14843 346 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 GPR42O15529 346 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 ASNA1O43681 348 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 ZRANB2O95218 330 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLK3-223ENST00000568488 ZWINTO95229 277 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 CRTAMO95727 393 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 PRSS56P0CW18 603 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 ICAM2P13598 275 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 AP2B1P63010 937 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 HSF1Q00613 529 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 FOLH1Q04609 750 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 LTBQ06643 244 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 MYBPHQ13203 477 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 MESDQ14696 234 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 PRMT9Q6P2P2 845 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 ALKBH5Q6P6C2 394 aaKnown RBP15.39■□□□□ 0.05
CLK3-223ENST00000568488 CEP128Q6ZU80 1094 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 Q71RC1 249 aaPredicted RBP15.39■□□□□ 0.05
CLK3-223ENST00000568488 BZW1Q7L1Q6 419 aaKnown RBP15.39■□□□□ 0.05
CLK3-223ENST00000568488 EID3Q8N140 333 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 SLC22A18Q96BI1 424 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 DMRTA2Q96SC8 542 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 HSD3B7Q9H2F3 369 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 LUC7LQ9NQ29 371 aaKnown RBP15.39■□□□□ 0.05
CLK3-223ENST00000568488 ANKRD10Q9NXR5 420 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 SMARCAL1Q9NZC9 954 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 TRPC4Q9UBN4 977 aa15.39■□□□□ 0.05
CLK3-223ENST00000568488 IGLV3-16A0A075B6K0 115 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 NKX2-6A6NCS4 301 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 FAM90A27PA6NNH2 459 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 ZNF487B1APH4 448 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 ADAM10O14672 748 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 SRPX2O60687 465 aaPredicted RBP15.38■□□□□ 0.05
CLK3-223ENST00000568488 KRT1P04264 644 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 GSTM1P09488 218 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 ACRV1P26436 265 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 EEF1DP29692 281 aaKnown RBP15.38■□□□□ 0.05
CLK3-223ENST00000568488 PKLRP30613 574 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 GSTM4Q03013 218 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 CEBPEQ15744 281 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 GPR33Q49SQ1 333 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 FILIP1LQ4L180 1135 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 SYTL3Q4VX76 610 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 FCRLBQ6BAA4 426 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 FRMPD2BQ6IN97 320 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 SASS6Q6UVJ0 657 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 GHDCQ8N2G8 530 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 LINC01555Q8NAE3 123 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 ZNF285Q96NJ3 590 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 UCK2Q9BZX2 261 aa15.38■□□□□ 0.05
CLK3-223ENST00000568488 NPDC1Q9NQX5 325 aaPredicted RBP15.38■□□□□ 0.05
CLK3-223ENST00000568488 BZW2Q9Y6E2 419 aaKnown RBP15.38■□□□□ 0.05
CLK3-223ENST00000568488 CPAMD8Q8IZJ3 1885 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 A0A0J9YVX5 310 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 RCCD1A6NED2 376 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 BHMG1C9JSJ3 638 aaPredicted RBP15.37■□□□□ 0.05
CLK3-223ENST00000568488 RASGRF2O14827 1237 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 TNNT1P13805 278 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 IGFBP2P18065 325 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 CD9P21926 228 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 NR2C2P49116 596 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 GEMP55040 296 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 CSE1LP55060 971 aaKnown RBP15.37■□□□□ 0.05
CLK3-223ENST00000568488 PCOLCEQ15113 449 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 TMTC1Q8IUR5 882 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 DMRTC2Q8IXT2 367 aaPredicted RBP15.37■□□□□ 0.05
CLK3-223ENST00000568488 BEST3Q8N1M1 668 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 IL17FQ96PD4 163 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 SIGLEC12Q96PQ1 595 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 ZNF700Q9H0M5 742 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 ANO10Q9NW15 660 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 UVRAGQ9P2Y5 699 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 FAM169AQ9Y6X4 670 aa15.37■□□□□ 0.05
CLK3-223ENST00000568488 ABCA4P78363 2273 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 IGLV3-12A0A075B6K2 115 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 A0A1W2PQ72 361 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 CTSVO60911 334 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 AP2A2O94973 939 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 S1PR4O95977 384 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 SERPING1P05155 500 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 FOSL1P15407 271 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 CD46P15529 392 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 PECAM1P16284 738 aaPredicted RBP15.36■□□□□ 0.05
CLK3-223ENST00000568488 TUBA3CQ13748 450 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 DSG2Q14126 1118 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 MUM1Q2TAK8 710 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 KAZNQ674X7 775 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 SPINK14Q6IE38 97 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 TUBA3EQ6PEY2 450 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.36■□□□□ 0.05
CLK3-223ENST00000568488 CFAP61Q8NHU2 1237 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 NINJ1Q92982 152 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 ZUFSPQ96AP4 578 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 CABS1Q96KC9 395 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 ZNF354BQ96LW1 612 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 VAT1Q99536 393 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 TRIM51Q9BSJ1 452 aa15.36■□□□□ 0.05
CLK3-223ENST00000568488 TUBB6Q9BUF5 446 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms