RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 VRK3Q8IV63 474 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 KRT222Q8N1A0 295 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 TRIM58Q8NG06 486 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 PPP4R1Q8TF05 950 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 WDR77Q9BQA1 342 aaPredicted RBP17.83■□□□□ 0.44
LINC01238-205ENST00000567549 MENTQ9BUN1 341 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 P2RY12Q9H244 342 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 KCNF1Q9H3M0 494 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 LUZP4Q9P127 313 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 FBXL4Q9UKA2 621 aa17.83■□□□□ 0.44
LINC01238-205ENST00000567549 SPTAN1Q13813 2472 aaKnown RBP17.83■□□□□ 0.44
LINC01238-205ENST00000567549 CYSRT1A8MQ03 144 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 IQCF5A8MTL0 148 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 TXNDC9O14530 226 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 HCRTR1O43613 425 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 C1orf105O95561 183 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 UMODP07911 640 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 CCDC175P0C221 793 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 TPSB2P20231 275 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 OGNP20774 298 aaKnown RBP17.82■□□□□ 0.44
LINC01238-205ENST00000567549 GRIA3P42263 894 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 GCGRP47871 477 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 EMP3P54852 163 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 SEMA3AQ14563 771 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 ARHGAP19Q14CB8 494 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 TPSAB1Q15661 275 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 NKG7Q16617 165 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 TTLL9Q3SXZ7 439 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 PLEKHN1Q494U1 663 aaPredicted RBP17.82■□□□□ 0.44
LINC01238-205ENST00000567549 ANKRD20A4Q4UJ75 823 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 LRRC8BQ6P9F7 803 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 Q6ZS92 163 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 C2orf73Q8N5S3 287 aaPredicted RBP17.82■□□□□ 0.44
LINC01238-205ENST00000567549 SNRNP40Q96DI7 357 aaKnown RBP17.82■□□□□ 0.44
LINC01238-205ENST00000567549 MVB12AQ96EY5 273 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 ZNF285Q96NJ3 590 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 IL17FQ96PD4 163 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 KIFC1Q9BW19 673 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 LHPPQ9H008 270 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 CCDC68Q9H2F9 335 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 ZNF304Q9HCX3 659 aa17.82■□□□□ 0.44
LINC01238-205ENST00000567549 ZNF282Q9UDV7 671 aaPredicted RBP17.82■□□□□ 0.44
LINC01238-205ENST00000567549 USP9XQ93008 2570 aaPredicted RBP17.81■□□□□ 0.44
LINC01238-205ENST00000567549 MAGEB16A2A368 324 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 HYKKA2RU49 373 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 VAPBO95292 243 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 CATP04040 527 aaKnown RBP17.81■□□□□ 0.44
LINC01238-205ENST00000567549 PKMP14618 531 aaKnown RBP17.81■□□□□ 0.44
LINC01238-205ENST00000567549 ETS1P14921 441 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 FDXRP22570 491 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 GLRBP48167 497 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 VSX2P58304 361 aaPredicted RBP17.81■□□□□ 0.44
LINC01238-205ENST00000567549 GRB7Q14451 532 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 WASHC2DQ5SRD0 308 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 B3GNTL1Q67FW5 361 aaPredicted RBP17.81■□□□□ 0.44
LINC01238-205ENST00000567549 FCRL6Q6DN72 434 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 OR2L3Q8NG85 312 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 GABPB2Q8TAK5 448 aaPredicted RBP17.81■□□□□ 0.44
LINC01238-205ENST00000567549 LKAAEAR1Q8TD35 194 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 SMPDL3AQ92484 453 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 C5orf34Q96MH7 638 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 ZFYVE21Q9BQ24 234 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 CRB3Q9BUF7 120 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 SLC6A20Q9NP91 592 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 MARCH4Q9P2E8 410 aaPredicted RBP17.81■□□□□ 0.44
LINC01238-205ENST00000567549 SLC5A6Q9Y289 635 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 KLHL20Q9Y2M5 609 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 ICE1Q9Y2F5 2266 aa17.81■□□□□ 0.44
LINC01238-205ENST00000567549 ANKUB1A6NFN9 424 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 MAP2K7O14733 419 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 ZNF500O60304 480 aaPredicted RBP17.8■□□□□ 0.44
LINC01238-205ENST00000567549 FGGP02679 453 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 CHRM3P20309 590 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 CXCR2P25025 360 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 RPA3P35244 121 aaPredicted RBP17.8■□□□□ 0.44
LINC01238-205ENST00000567549 PER3P56645 1201 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 NR6A1Q15406 480 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 TYSND1Q2T9J0 566 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 EIF2S3LQ2VIR3 472 aaKnown RBP17.8■□□□□ 0.44
LINC01238-205ENST00000567549 KIAA0930Q6ICG6 404 aaPredicted RBP17.8■□□□□ 0.44
LINC01238-205ENST00000567549 CNSTQ6PJW8 725 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 ZNF662Q6ZS27 426 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 LDB1Q86U70 411 aaPredicted RBP17.8■□□□□ 0.44
LINC01238-205ENST00000567549 CISD2Q8N5K1 135 aaKnown RBP17.8■□□□□ 0.44
LINC01238-205ENST00000567549 MIEF2Q96C03 454 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 SPSB2Q99619 263 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 MIPEPQ99797 713 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 ASF1BQ9NVP2 202 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 INTS10Q9NVR2 710 aaKnown RBP17.8■□□□□ 0.44
LINC01238-205ENST00000567549 SOX13Q9UN79 622 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 RELNP78509 3460 aa17.8■□□□□ 0.44
LINC01238-205ENST00000567549 USP1O94782 785 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 MYBL2P10244 700 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 ACPPP15309 386 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 FBLP22087 321 aaKnown RBP17.79■□□□□ 0.44
LINC01238-205ENST00000567549 NMBRP28336 390 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 MRPL49Q13405 166 aaKnown RBP17.79■□□□□ 0.44
LINC01238-205ENST00000567549 TLR1Q15399 786 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 PRR30Q53SZ7 412 aaPredicted RBP17.79■□□□□ 0.44
LINC01238-205ENST00000567549 CASC4Q6P4E1 433 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms