RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CCDC3Q9BQI4 270 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 TMEM79Q9BSE2 394 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 MENTQ9BUN1 341 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 ACAT2Q9BWD1 397 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 SGPP1Q9BX95 441 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 LRRN3Q9H3W5 708 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 SYNDIG1Q9H7V2 258 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 EML4Q9HC35 981 aaKnown RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 INTS7Q9NVH2 962 aaKnown RBP7.53□□□□□ -1.2
CDH1-208ENST00000565810 ACTR10Q9NZ32 417 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 GPRC5BQ9NZH0 403 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 RAPGEFL1Q9UHV5 662 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 STK38LQ9Y2H1 464 aa7.53□□□□□ -1.2
CDH1-208ENST00000565810 IGHV1OR21-1A0A087WYE8 117 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 LY6G6EA0A0G2JKS1 128 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CAPN5O15484 640 aaPredicted RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 B4GAT1O43505 415 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 NPHS1O60500 1241 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CBFA2T3O75081 653 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 SERPINE1P05121 402 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 RPS17P08708 135 aaKnown RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 CDK4P11802 303 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 GNAZP19086 355 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 BGNP21810 368 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 SDHBP21912 280 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CDH3P22223 829 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 HRH2P25021 359 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CXCR2P25025 360 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 PRDX3P30048 256 aaKnown RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 GRK3P35626 688 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 SERPINB5P36952 375 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CCNG1P51959 295 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CLCQ05315 142 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 PRDX1Q06830 199 aaKnown RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 STX3Q13277 289 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 GTF2H2Q13888 395 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 TRIP6Q15654 476 aaKnown RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 CHI3L2Q15782 390 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 RBBP7Q16576 425 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 PDK4Q16654 411 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 C18orf21Q32NC0 220 aaPredicted RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 UNC50Q53HI1 259 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 FBXO48Q5FWF7 155 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 NKAIN2Q5VXU1 208 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 GTF2H2CQ6P1K8 395 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 USP53Q70EK8 1073 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 SPRED1Q7Z699 444 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 MTERF4Q7Z6M4 381 aaKnown RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 C17orf64Q86WR6 236 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 HOMEZQ8IX15 550 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 LRRC56Q8IYG6 542 aaPredicted RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 KIAA2013Q8IYS2 634 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 ADGRF3Q8IZF5 1079 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 TBC1D19Q8N5T2 526 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 LINC01555Q8NAE3 123 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 RAB3IL1Q8TBN0 382 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 SLC5A11Q8WWX8 675 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 RSC1A1Q92681 617 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 L3HYPDHQ96EM0 354 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CNDP1Q96KN2 507 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 MAGEB10Q96LZ2 347 aaPredicted RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 TGM7Q96PF1 710 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 TMEM237Q96Q45 408 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CD180Q99467 661 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 TRMOQ9BU70 441 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 MECRQ9BV79 373 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 GATA5Q9BWX5 397 aaPredicted RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 C1QTNF3Q9BXJ4 246 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 DRC3Q9H069 523 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 RAB33BQ9H082 229 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 NOL11Q9H8H0 719 aaKnown RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 MANSC1Q9H8J5 431 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 IPPKQ9H8X2 491 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 PRM3Q9NNZ6 103 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 MRPS30Q9NP92 439 aaKnown RBP7.52□□□□□ -1.21
CDH1-208ENST00000565810 SPHK1Q9NYA1 384 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 EPHA6Q9UF33 1036 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 TAC3Q9UHF0 121 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 U3KQA8 63 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CACNA1EQ15878 2313 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 CEP192Q8TEP8 1941 aa7.52□□□□□ -1.21
CDH1-208ENST00000565810 FANCMQ8IYD8 2048 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 FRYLO94915 3013 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 TNRC6BQ9UPQ9 1833 aaKnown RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 A0A0J9YY10 115 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 A0A1W2PPV9 198 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 TMEM114B3SHH9 223 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 E2F3O00716 465 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 CRCPO75575 148 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 RFPL3O75679 317 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 RASSF9O75901 435 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 SNUPNO95149 360 aaKnown RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 CPNE6O95741 557 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 HSPA4LO95757 839 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 OTCP00480 354 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 RPLP0P05388 317 aaKnown RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 FGF3P11487 239 aaPredicted RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 UGT2B7P16662 529 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 NPPBP16860 134 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 CSRP1P21291 193 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms