RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 MPP1Q00013 466 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 CUL1Q13616 776 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 KLHL38Q2WGJ6 581 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 MSS51Q4VC12 460 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 RNASEH2BQ5TBB1 312 aaKnown RBP14.09□□□□□ -0.15
USB1-210ENST00000565151 ZNF470Q6ECI4 717 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 CASC4Q6P4E1 433 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 TTLL10Q6ZVT0 673 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 SDCCAG8Q86SQ7 713 aaPredicted RBP14.09□□□□□ -0.15
USB1-210ENST00000565151 IGDCC3Q8IVU1 814 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 SHISA5Q8N114 240 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 METTL27Q8N6F8 245 aaPredicted RBP14.09□□□□□ -0.15
USB1-210ENST00000565151 RBMXL3Q8N7X1 1067 aaKnown RBP14.09□□□□□ -0.15
USB1-210ENST00000565151 OR2Y1Q8NGV0 311 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 ACTRT1Q8TDG2 376 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 N4BP2L2Q92802 583 aaPredicted RBP14.09□□□□□ -0.15
USB1-210ENST00000565151 DHRS4Q9BTZ2 278 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 ZBTB20Q9HC78 741 aaPredicted RBP14.09□□□□□ -0.15
USB1-210ENST00000565151 LUZP4Q9P127 313 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.09□□□□□ -0.15
USB1-210ENST00000565151 IFT80Q9P2H3 777 aaPredicted RBP14.09□□□□□ -0.15
USB1-210ENST00000565151 SLC39A10Q9ULF5 831 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 HIVEP3Q5T1R4 2406 aa14.09□□□□□ -0.15
USB1-210ENST00000565151 CPAMD8Q8IZJ3 1885 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 FITM1A5D6W6 292 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 C9J4A7 227 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 MYO1CO00159 1063 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 PGRMC1O00264 195 aaKnown RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 KPNA5O15131 536 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 FANCGO15287 622 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 PHF2O75151 1096 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 ALOX12BO75342 701 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SORBS2O94875 1100 aaKnown RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 CHRM3P20309 590 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 GABRB3P28472 473 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 ATP5DP30049 168 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 OR1D4P47884 311 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 UQCRFS1P47985 274 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SSPNQ14714 243 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SUSD1Q6UWL2 747 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 LRRC56Q8IYG6 542 aaPredicted RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 AMER2Q8N7J2 671 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 PPFIBP2Q8ND30 876 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SKA2Q8WVK7 121 aaPredicted RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 DLG3Q92796 817 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 ZUFSPQ96AP4 578 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SLC22A18Q96BI1 424 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 PWWP2AQ96N64 755 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 PKP4Q99569 1192 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SPSB2Q99619 263 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SMAD5Q99717 465 aaKnown RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 WDR83Q9BRX9 315 aaKnown RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 NDC1Q9BTX1 674 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 ACAT2Q9BWD1 397 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 DDX47Q9H0S4 455 aaKnown RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 GRPEL1Q9HAV7 217 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 INTS10Q9NVR2 710 aaKnown RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 TRMT1Q9NXH9 659 aaKnown RBP14.08□□□□□ -0.16
USB1-210ENST00000565151 CTSFQ9UBX1 484 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SNX12Q9UMY4 172 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 SRPK3Q9UPE1 567 aa14.08□□□□□ -0.16
USB1-210ENST00000565151 OR2A25A4D2G3 310 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 TARM1B6A8C7 271 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 DSCR3O14972 297 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 KDM1AO60341 852 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 HAUS5O94927 633 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 ALAS2P22557 587 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 PGGT1BP53609 377 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 VSX2P58304 361 aaPredicted RBP14.07□□□□□ -0.16
USB1-210ENST00000565151 WASHC2DQ5SRD0 308 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 RNF187Q5TA31 235 aaPredicted RBP14.07□□□□□ -0.16
USB1-210ENST00000565151 SHISA6Q6ZSJ9 500 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 MED25Q71SY5 747 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 RNF44Q7L0R7 432 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 OVCH1Q7RTY7 1134 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 ARHGEF39Q8N4T4 335 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 TMEM102Q8N9M5 508 aaPredicted RBP14.07□□□□□ -0.16
USB1-210ENST00000565151 OR9A1PQ8NGU1 263 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 C10orf90Q96M02 699 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 SELENOSQ9BQE4 189 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 DPH7Q9BTV6 452 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 MFRPQ9BY79 579 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 XAB2Q9HCS7 855 aaKnown RBP14.07□□□□□ -0.16
USB1-210ENST00000565151 CUTCQ9NTM9 273 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 TXLNGQ9NUQ3 528 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 P4HTMQ9NXG6 502 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 SPATA7Q9P0W8 599 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 SLC17A6Q9P2U8 582 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 ICE1Q9Y2F5 2266 aa14.07□□□□□ -0.16
USB1-210ENST00000565151 LRRK2Q5S007 2527 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 A0A0J9YVX5 310 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 A0A1B0GX78 115 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 H3BMM5 538 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 GFYI3L273 518 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 SOCS6O14544 535 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 USP1O94782 785 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 SLC16A8O95907 504 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 FOLR3P41439 243 aa14.06□□□□□ -0.16
USB1-210ENST00000565151 SARNPP82979 210 aaKnown RBP14.06□□□□□ -0.16
USB1-210ENST00000565151 NKG7Q16617 165 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms