RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 CENPHQ9H3R5 247 aa12.31□□□□□ -0.44
CDH11-204ENST00000562712 CNOT10Q9H9A5 744 aaKnown RBP12.31□□□□□ -0.44
CDH11-204ENST00000562712 MKS1Q9NXB0 559 aa12.31□□□□□ -0.44
CDH11-204ENST00000562712 NUDT4Q9NZJ9 180 aa12.31□□□□□ -0.44
CDH11-204ENST00000562712 CD274Q9NZQ7 290 aa12.31□□□□□ -0.44
CDH11-204ENST00000562712 TMEM216Q9P0N5 145 aa12.31□□□□□ -0.44
CDH11-204ENST00000562712 TMEM9Q9P0T7 183 aa12.31□□□□□ -0.44
CDH11-204ENST00000562712 PTBP2Q9UKA9 531 aaKnown RBP12.31□□□□□ -0.44
CDH11-204ENST00000562712 TMCO1Q9UM00 188 aa12.31□□□□□ -0.44
CDH11-204ENST00000562712 PKD1L2Q7Z442 2459 aa12.31□□□□□ -0.44
CDH11-204ENST00000562712 TLCD2A6NGC4 264 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 NCF1BA6NI72 391 aaPredicted RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 NCF1CA8MVU1 366 aaPredicted RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 TARM1B6A8C7 271 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 AGPSO00116 658 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 UBXN8O00124 270 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 COPEO14579 308 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 HGSO14964 777 aaPredicted RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 KLK8O60259 260 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 S100BP04271 92 aaPredicted RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 NCF1P14598 390 aaPredicted RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 UGT2B7P16662 529 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 NPPBP16860 134 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 MPSTP25325 297 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 RPA3P35244 121 aaPredicted RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 PDX1P52945 283 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 PPP1CAP62136 330 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 PRDX1Q06830 199 aaKnown RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 NAE1Q13564 534 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 CCDC153Q494R4 210 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 CACHD1Q5VU97 1274 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 CAPN13Q6MZZ7 669 aaPredicted RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 SUSD1Q6UWL2 747 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 FAM92BQ6ZTR7 304 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 B3GNT8Q7Z7M8 397 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 EXOC3L1Q86VI1 746 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 KMT5CQ86Y97 462 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 KLHDC8AQ8IYD2 350 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 C4orf33Q8N1A6 199 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 KLHL6Q8WZ60 621 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 GATA6Q92908 595 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 ZUFSPQ96AP4 578 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 CCDC74BQ96LY2 380 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 MAP3K3Q99759 626 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 MIPEPQ99797 713 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 STRADBQ9C0K7 418 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 ZNF768Q9H5H4 540 aaKnown RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 TMBIM4Q9HC24 238 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 SSU72Q9NP77 194 aaKnown RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 CCDC177Q9NQR7 707 aaPredicted RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 INTS7Q9NVH2 962 aaKnown RBP12.3□□□□□ -0.44
CDH11-204ENST00000562712 XPR1Q9UBH6 696 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 KLK13Q9UKR3 277 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 NEUROG3Q9Y4Z2 214 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 KLK4Q9Y5K2 254 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 ACTL7BQ9Y614 415 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 UNC13CQ8NB66 2214 aa12.3□□□□□ -0.44
CDH11-204ENST00000562712 ANKRD11Q6UB99 2663 aaPredicted RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 IGHV5-51A0A0C4DH38 117 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 A8MU76 341 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 C1QTNF9BB2RNN3 333 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 SUPT3HB4E1H0 165 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 TAPBPO15533 448 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 MAP3K7O43318 606 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 KIF1CO43896 1103 aaKnown RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 CSO75390 466 aaKnown RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 SUPT3HO75486 399 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 RASSF9O75901 435 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 IPO13O94829 963 aaKnown RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 ZBTB11O95625 1053 aaPredicted RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 SBK3P0C264 359 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 C1QTNF9P0C862 333 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 CDH3P22223 829 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 SLC6A12P48065 614 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 ALDH18A1P54886 795 aaKnown RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 TBPL1P62380 186 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 ABATP80404 500 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 TARDBPQ13148 414 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDH11-204ENST00000562712 PTCHD3Q3KNS1 767 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 SNAP47Q5SQN1 464 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 PHF19Q5T6S3 580 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 THEMIS2Q5TEJ8 643 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 METTL2BQ6P1Q9 378 aaKnown RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 C16orf46Q6P387 395 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 UNQ6494/PRO21346Q6UXR6 183 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 CDHR3Q6ZTQ4 885 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 TAX1BP1Q86VP1 789 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 CHCHD4Q8N4Q1 142 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 OR2L3Q8NG85 312 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 MED8Q96G25 268 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 LIN37Q96GY3 246 aaPredicted RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 APOPT1Q96IL0 206 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 HAUS8Q9BT25 410 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 CD244Q9BZW8 370 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 CHRNA10Q9GZZ6 450 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 CPSF2Q9P2I0 782 aaKnown RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 KLHL3Q9UH77 587 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 PLLPQ9Y342 182 aa12.29□□□□□ -0.44
CDH11-204ENST00000562712 TNPO3Q9Y5L0 923 aaKnown RBP12.29□□□□□ -0.44
CDH11-204ENST00000562712 COL27A1Q8IZC6 1860 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms