RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CIDEBQ9UHD4 219 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 PNMA8BQ9ULN7 279 aaPredicted RBP9.98□□□□□ -0.81
USP3-219ENST00000561326 RNF11Q9Y3C5 154 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 TIMM22Q9Y584 194 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 ST14Q9Y5Y6 855 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 CROCCQ5TZA2 2017 aa9.98□□□□□ -0.81
USP3-219ENST00000561326 TRBV23OR9-2A0A075B6M9 112 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 KRT87PA6NCN2 255 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 SDHDO14521 159 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 FCHO1O14526 889 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 PIP5K1BO14986 540 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 RGS14O43566 566 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ATP5HO75947 161 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 WFS1O76024 890 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 CCNDBP1O95273 360 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 LINC00032P0C843 101 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 C1GALT1C1LP0DN25 315 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ERGP11308 486 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 JUPP14923 745 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 CXCR2P25025 360 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 EPHA3P29320 983 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 AVPR2P30518 371 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ADSLP30566 484 aaPredicted RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 SLC19A1P41440 591 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 FOXA1P55317 472 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 DOC2AQ14183 400 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 GRB7Q14451 532 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 TCEA2Q15560 299 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 CPSF6Q16630 551 aaKnown RBP eCLIP9.97□□□□□ -0.81
USP3-219ENST00000561326 IMPG1Q17R60 797 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 LSM12Q3MHD2 195 aaKnown RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 PRAMEF14Q5SWL7 426 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 C10orf62Q5T681 223 aaPredicted RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 PRAMEF13Q5VWM6 474 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 IL27RAQ6UWB1 636 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 SUSD1Q6UWL2 747 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 RNF165Q6ZSG1 346 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 YTHDF3Q7Z739 585 aaKnown RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 CLNKQ7Z7G1 428 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 SLC9B2Q86UD5 537 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 MAML2Q8IZL2 1156 aaPredicted RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 FITM2Q8N6M3 262 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 PPFIBP2Q8ND30 876 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 LMX1AQ8TE12 382 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 UBE2E3Q969T4 207 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 SLC22A18Q96BI1 424 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 TUBGCP3Q96CW5 907 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ERP27Q96DN0 273 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 PTCD3Q96EY7 689 aaKnown RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 MAELQ96JY0 434 aaKnown RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 ZC3H10Q96K80 434 aaKnown RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 KCNA7Q96RP8 456 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 EFCAB11Q9BUY7 163 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 TCEAL2Q9H3H9 227 aaPredicted RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 EHD1Q9H4M9 534 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ELOVL6Q9H5J4 265 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 PRM3Q9NNZ6 103 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 SAR1AQ9NR31 198 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ZSCAN32Q9NX65 697 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 OR6C2Q9NZP2 312 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ZNF624Q9P2J8 865 aaPredicted RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 KLF15Q9UIH9 416 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ZNF225Q9UK10 706 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ZNF490Q9ULM2 529 aaPredicted RBP9.97□□□□□ -0.81
USP3-219ENST00000561326 PLAGL1Q9UM63 463 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 PCDHB11Q9Y5F2 797 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 PCDHGA11Q9Y5H2 935 aa9.97□□□□□ -0.81
USP3-219ENST00000561326 ADAMTS9Q9P2N4 1935 aa9.96□□□□□ -0.81
USP3-219ENST00000561326 A0A1B0GTL3 188 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 A6NCN8 305 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 E9PBE3 544 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 MANBAO00462 879 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 FFAR3O14843 346 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 UBDO15205 165 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 GPR42O15529 346 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 HRO43593 1189 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 DFNA5O60443 496 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 KLHL41O60662 606 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 ANXA6P08133 673 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 EZRP15311 586 aaKnown RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 PCSK2P16519 638 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 LBPP18428 481 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 EPORP19235 508 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 HRH2P25021 359 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 PKLRP30613 574 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 HOXD12P35452 270 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 ARRB1P49407 418 aaPredicted RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 RASSF2P50749 326 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 BIRC2Q13490 618 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 TUBB3Q13509 450 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 C1orf61Q13536 156 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 FASTKQ14296 549 aaKnown RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 PLCL1Q15111 1095 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 RPS6KA2Q15349 733 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 ZRSR2Q15696 482 aaKnown RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 SMU1Q2TAY7 513 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 PLK5Q496M5 336 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 ATG9BQ674R7 924 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 GRHL2Q6ISB3 625 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 DUS1LQ6P1R4 473 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms