RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 A3GALT2U3KPV4 340 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 MEIOCA2RUB1 952 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 M0R129 80 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 GPR39O43194 453 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 IL6P05231 212 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 FABP3P05413 133 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 PKMP14618 531 aaKnown RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 SOX6P35712 828 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 MAGEA2P43356 314 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 MAGEA11P43364 429 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 FOXD4Q12950 439 aaPredicted RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 SMU1Q2TAY7 513 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 CCDC190Q86UF4 302 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 C11orf74Q86VG3 221 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 CALHM3Q86XJ0 350 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 ELMOD2Q8IZ81 293 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 PIK3R3Q92569 461 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 RMDN1Q96DB5 314 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 MED30Q96HR3 178 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 NMUR1Q9HB89 426 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 BPIFA1Q9NP55 256 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 IL1RAPQ9NPH3 570 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 RAD18Q9NS91 495 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 THUMPD1Q9NXG2 353 aaKnown RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 PCM1Q15154 2024 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 FGF1P05230 155 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 CYP2A7P20853 494 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 IFNA8P32881 189 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 ACVRL1P37023 503 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 HTR2BP41595 481 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 IDH2P48735 452 aaKnown RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 GZMMP51124 257 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 FAM189BP81408 668 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 CD83Q01151 205 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 MADCAM1Q13477 382 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 CACHD1Q5VU97 1274 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 CD200R1Q8TD46 325 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 HASPINQ8TF76 798 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 SPATA17Q96L03 361 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 B3GALT6Q96L58 329 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 MUTYHQ9UIF7 546 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 PSORS1C1Q9UIG5 152 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 ZNF490Q9ULM2 529 aaPredicted RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 SAMD4AQ9UPU9 718 aaKnown RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 KLHL20Q9Y2M5 609 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 ARHGAP33O14559 1287 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 GPR182O15218 404 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 CPNE3O75131 537 aaKnown RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 LRATO95237 230 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 ADORA3P0DMS8 318 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 TNFSF8P32971 234 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 RFX2P48378 723 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 TUFMP49411 452 aaKnown RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 RGS6P49758 472 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 TBCEQ15813 527 aaPredicted RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 AGMOQ6ZNB7 445 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 STX19Q8N4C7 294 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 TSEN34Q9BSV6 310 aaKnown RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 BBS2Q9BXC9 721 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 PAPPA2Q9BXP8 1791 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 CLPBQ9H078 707 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 NSUN3Q9H649 340 aaKnown RBP16.06■□□□□ 0.16
TPM1-228ENST00000560975 REEP1Q9H902 201 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 CSNK1G1Q9HCP0 422 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 ABCC13Q9NSE7 274 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 CCL27Q9Y4X3 112 aa16.06■□□□□ 0.16
TPM1-228ENST00000560975 RGS14O43566 566 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 MRPS14O60783 128 aaKnown RBP16.05■□□□□ 0.16
TPM1-228ENST00000560975 HLA-DPA1P20036 260 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 ARPP19P56211 112 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 ZNF235Q14590 738 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 PTPRRQ15256 657 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 CTSL3PQ5NE16 218 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 PEX5LQ8IYB4 626 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 UMODL1-AS1Q8N2C9 162 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 UBE2J2Q8N2K1 259 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 MYDGFQ969H8 173 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 TPD52L3Q96J77 140 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 CLMPQ9H6B4 373 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 HECAQ9UBI9 543 aaPredicted RBP16.05■□□□□ 0.16
TPM1-228ENST00000560975 TRBV5-3A0A0A0MS03 114 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 UNCXA6NJT0 531 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 SNX4O95219 450 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 CDK1P06493 297 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 ZRANB3Q5FWF4 1079 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 NOXA1Q86UR1 476 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 TMEM132CQ8N3T6 1108 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 LPPQ93052 612 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 EXOC2Q96KP1 924 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 NECTIN4Q96NY8 510 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 RTP3Q9BQQ7 232 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 POLR1EQ9GZS1 481 aaKnown RBP16.05■□□□□ 0.16
TPM1-228ENST00000560975 ELP3Q9H9T3 547 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 TIGARQ9NQ88 270 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 A0A1W2PQH9 124 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 ITGB1P05556 798 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 COL6A1P12109 1028 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 HNF4AP41235 474 aa16.05■□□□□ 0.16
TPM1-228ENST00000560975 PIK3CBP42338 1070 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms