RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SLC19A2O60779 497 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 ZNF189O75820 626 aaPredicted RBP17.68■□□□□ 0.42
TPM1-226ENST00000560959 WFS1O76024 890 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 ICAM2P13598 275 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 CXCR2P25025 360 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 HADHBP55084 474 aaKnown RBP17.68■□□□□ 0.42
TPM1-226ENST00000560959 ADORA2A-AS1P86434 159 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 SF1Q15637 639 aaKnown RBP17.68■□□□□ 0.42
TPM1-226ENST00000560959 WASHC2DQ5SRD0 308 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 SLC22A15Q8IZD6 547 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 LMNTD1Q8N9Z9 388 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 C8orf44Q96CB5 159 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 MTFMTQ96DP5 389 aaKnown RBP17.68■□□□□ 0.42
TPM1-226ENST00000560959 SPATA13Q96N96 652 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 MESP1Q9BRJ9 268 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 C10orf88Q9H8K7 445 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 RIC8BQ9NVN3 520 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.68■□□□□ 0.42
TPM1-226ENST00000560959 PCDHGB6Q9Y5F9 930 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 MTORP42345 2549 aa17.68■□□□□ 0.42
TPM1-226ENST00000560959 IGHV1-45A0A0A0MS14 117 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 PRAMEF2O60811 474 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 CLDN14O95500 239 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 WDPCPO95876 746 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 ESRRAP11474 423 aaPredicted RBP17.67■□□□□ 0.42
TPM1-226ENST00000560959 EMP3P54852 163 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 COPS2P61201 443 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 GRB7Q14451 532 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 KCTD11Q693B1 232 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 CNSTQ6PJW8 725 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 UNC5DQ6UXZ4 953 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 CCDC50Q8IVM0 306 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 CDKL3Q8IVW4 592 aaPredicted RBP17.67■□□□□ 0.42
TPM1-226ENST00000560959 DCUN1D3Q8IWE4 304 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 ADAMTS18Q8TE60 1221 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 THAP3Q8WTV1 239 aaPredicted RBP17.67■□□□□ 0.42
TPM1-226ENST00000560959 CCDC42Q96M95 316 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 ZNF835Q9Y2P0 537 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 FAM169AQ9Y6X4 670 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 ITPR3Q14573 2671 aa17.67■□□□□ 0.42
TPM1-226ENST00000560959 OR5H15A6NDH6 313 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 CTSVO60911 334 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 EMP2P54851 167 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 VSX2P58304 361 aaPredicted RBP17.66■□□□□ 0.42
TPM1-226ENST00000560959 MUM1Q2TAK8 710 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 KRTCAP3Q53RY4 240 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 NAPRTQ6XQN6 538 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 Q6ZPB1 254 aaPredicted RBP17.66■□□□□ 0.42
TPM1-226ENST00000560959 LUZP1Q86V48 1076 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 LAPTM4BQ86VI4 370 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 METTL27Q8N6F8 245 aaPredicted RBP17.66■□□□□ 0.42
TPM1-226ENST00000560959 SIRT6Q8N6T7 355 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 ACBD4Q8NC06 268 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 ASZ1Q8WWH4 475 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 MVB12AQ96EY5 273 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 ALS2CR12Q96Q35 445 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 TTC1Q99614 292 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 RAB11FIP5Q9BXF6 653 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 HEMGNQ9BXL5 484 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 NHEJ1Q9H9Q4 299 aaPredicted RBP17.66■□□□□ 0.42
TPM1-226ENST00000560959 CDC14AQ9UNH5 594 aa17.66■□□□□ 0.42
TPM1-226ENST00000560959 SNRNP200O75643 2136 aaKnown RBP17.65■□□□□ 0.42
TPM1-226ENST00000560959 LOC102723996A0A087X1L8 192 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 MROH6A6NGR9 719 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 IDSB3KWA1 339 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 RASGRF2O14827 1237 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 GPC4O75487 556 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 MED26O95402 600 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 RBP3P10745 1247 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 MSNP26038 577 aaKnown RBP17.65■□□□□ 0.42
TPM1-226ENST00000560959 TRIM14Q14142 442 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 SPARCL1Q14515 664 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 LONRF1Q17RB8 773 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 HIBCHQ6NVY1 386 aaPredicted RBP17.65■□□□□ 0.42
TPM1-226ENST00000560959 CDH24Q86UP0 819 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 DTWD1Q8N5C7 304 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 C2orf73Q8N5S3 287 aaPredicted RBP17.65■□□□□ 0.42
TPM1-226ENST00000560959 ACTL9Q8TC94 416 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 CHP1Q99653 195 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 TGIF2Q9GZN2 237 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 MCCC2Q9HCC0 563 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 GPAMQ9HCL2 828 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 SPTLC3Q9NUV7 552 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 C14orf105Q9NVL8 296 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 STMN3Q9NZ72 180 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 IFNKQ9P0W0 207 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 ZC3H7BQ9UGR2 993 aaKnown RBP17.65■□□□□ 0.42
TPM1-226ENST00000560959 TEKT2Q9UIF3 430 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 SLC39A10Q9ULF5 831 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 GTF3C3Q9Y5Q9 886 aa17.65■□□□□ 0.42
TPM1-226ENST00000560959 C19orf84I3L1E1 186 aa17.64■□□□□ 0.41
TPM1-226ENST00000560959 PRPF4O43172 522 aaKnown RBP eCLIP17.64■□□□□ 0.41
TPM1-226ENST00000560959 MLYCDO95822 493 aa17.64■□□□□ 0.41
TPM1-226ENST00000560959 FBLP22087 321 aaKnown RBP17.64■□□□□ 0.41
TPM1-226ENST00000560959 CCR7P32248 378 aa17.64■□□□□ 0.41
TPM1-226ENST00000560959 FOXN2P32314 431 aa17.64■□□□□ 0.41
TPM1-226ENST00000560959 KIR3DL1P43629 444 aa17.64■□□□□ 0.41
TPM1-226ENST00000560959 KRTAP10-9P60411 292 aa17.64■□□□□ 0.41
TPM1-226ENST00000560959 DSG2Q14126 1118 aa17.64■□□□□ 0.41
TPM1-226ENST00000560959 C3AR1Q16581 482 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms