RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 THAP1Q9NVV9 213 aa10.09□□□□□ -0.79
TPM1-221ENST00000559831 LRIT1Q9P2V4 623 aa10.09□□□□□ -0.79
TPM1-221ENST00000559831 TAC3Q9UHF0 121 aa10.09□□□□□ -0.79
TPM1-221ENST00000559831 PADI4Q9UM07 663 aa10.09□□□□□ -0.79
TPM1-221ENST00000559831 SH2B3Q9UQQ2 575 aa10.09□□□□□ -0.79
TPM1-221ENST00000559831 FIS1Q9Y3D6 152 aa10.09□□□□□ -0.79
TPM1-221ENST00000559831 RP1P56715 2156 aa10.09□□□□□ -0.79
TPM1-221ENST00000559831 GPR179Q6PRD1 2367 aa10.09□□□□□ -0.79
TPM1-221ENST00000559831 A0A1W2PPV9 198 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 CPED1A4D0V7 1026 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 BTN3A3O00478 584 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 OR7A17O14581 309 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 SNNO75324 88 aaPredicted RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 MLYCDO95822 493 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 ZNF883P0CG24 379 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 KITP10721 976 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 AMD1P17707 334 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 PEBP1P30086 187 aaKnown RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 SEC24CP53992 1094 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 CBX1P83916 185 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 DAB2P98082 770 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 OCRLQ01968 901 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 PRKAA1Q13131 559 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 INAVAQ3KP66 663 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 AASDHQ4L235 1098 aaPredicted RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 FAM219BQ5XKK7 198 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 ARMC6Q6NXE6 501 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 METTL2BQ6P1Q9 378 aaKnown RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 LCTLQ6UWM7 567 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 ATG14Q6ZNE5 492 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 GPRIN3Q6ZVF9 776 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 TMPRSS11BQ86T26 416 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 SYVN1Q86TM6 617 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 OOSP2Q86WS3 158 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 MYLK4Q86YV6 388 aaPredicted RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 CRLF3Q8IUI8 442 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 ADGRF3Q8IZF5 1079 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 ZNF781Q8N8C0 355 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 DCBLD1Q8N8Z6 715 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 Q8N9G6 341 aaPredicted RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 OR52B6Q8NGF0 335 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 HMGCLL1Q8TB92 370 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 AGAP11Q8TF27 550 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 SETD7Q8WTS6 366 aaKnown RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 RSC1A1Q92681 617 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 CHMP6Q96FZ7 201 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 CDK15Q96Q40 435 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 SORT1Q99523 831 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 MIPEPQ99797 713 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 TRMOQ9BU70 441 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 FAM107BQ9H098 131 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 PCBD2Q9H0N5 130 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 RABEP2Q9H5N1 569 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 ACTR8Q9H981 624 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 UCK1Q9HA47 277 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 TMEM9BQ9NQ34 198 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 FGFR1OP2Q9NVK5 253 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 DNAAF2Q9NVR5 837 aaKnown RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 PNPOQ9NVS9 261 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 SPHK1Q9NYA1 384 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 KCNK4Q9NYG8 393 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 OR6C2Q9NZP2 312 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 MARCOQ9UEW3 520 aaPredicted RBP10.08□□□□□ -0.8
TPM1-221ENST00000559831 BTBD3Q9Y2F9 522 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 STK38LQ9Y2H1 464 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 HCN4Q9Y3Q4 1203 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 PCDHB11Q9Y5F2 797 aa10.08□□□□□ -0.8
TPM1-221ENST00000559831 ASCC3Q8N3C0 2202 aaKnown RBP10.07□□□□□ -0.8
TPM1-221ENST00000559831 MDC1Q14676 2089 aaKnown RBP10.07□□□□□ -0.8
TPM1-221ENST00000559831 A0A1B0GTL3 188 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 PIPSLA2A3N6 862 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 FAM221BA6H8Z2 402 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 LILRA5A6NI73 299 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 E7EQ34 232 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 UBFD1O14562 309 aaKnown RBP10.07□□□□□ -0.8
TPM1-221ENST00000559831 EDF1O60869 148 aaKnown RBP10.07□□□□□ -0.8
TPM1-221ENST00000559831 LRP3O75074 770 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 UBXN7O94888 489 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 OR4F21O95013 312 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 CCNDBP1O95273 360 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 OTCP00480 354 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 PROS1P07225 676 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 CDH1P12830 882 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 GLB1P16278 677 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 NPPBP16860 134 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 EPORP19235 508 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 ALDH4A1P30038 563 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 PRDX3P30048 256 aaKnown RBP10.07□□□□□ -0.8
TPM1-221ENST00000559831 PKNOX1P55347 436 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 OR1D5P58170 312 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 IRF8Q02556 426 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 SF3A3Q12874 501 aaKnown RBP eCLIP10.07□□□□□ -0.89e-9■■■■□ 23.4
TPM1-221ENST00000559831 CHIT1Q13231 466 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 SF1Q15637 639 aaKnown RBP10.07□□□□□ -0.8
TPM1-221ENST00000559831 CSRP2Q16527 193 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 TUBB8Q3ZCM7 444 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 XKR6Q5GH73 641 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 SH2D4BQ5SQS7 431 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 ICE2Q659A1 982 aa10.07□□□□□ -0.8
TPM1-221ENST00000559831 GUSBP11Q6P575 273 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms