RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PIPSLA2A3N6 862 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 D6RAR5 112 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ZW10O43264 779 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ZWINTO95229 277 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 KCNK5O95279 499 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 GUCA1CO95843 209 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 RPLP0P05388 317 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 RPS17P08708 135 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ANKRD34CP0C6C1 535 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 UGT2B7P16662 529 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ATP5F1P24539 256 aaPredicted RBP14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 OAS2P29728 719 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ALDH4A1P30038 563 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 PRDX3P30048 256 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 PRKAA2P54646 552 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 WDR4P57081 412 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 DNAJB13P59910 316 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 PPP1CAP62136 330 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 E2F1Q01094 437 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 INSM1Q01101 510 aaPredicted RBP14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 PRDX1Q06830 199 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 PLCL1Q15111 1095 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 NKAIN2Q5VXU1 208 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 SPESP1Q6UW49 350 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 PRSS42Q7Z5A4 293 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ARHGAP22Q7Z5H3 698 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 RAB42Q8N4Z0 105 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 PPFIBP2Q8ND30 876 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 OR4D9Q8NGE8 314 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 FAM111AQ96PZ2 611 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 NUDT22Q9BRQ3 303 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ATG10Q9H0Y0 220 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ACBD3Q9H3P7 528 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 CENPHQ9H3R5 247 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 MED4Q9NPJ6 270 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 ACTR10Q9NZ32 417 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 CD274Q9NZQ7 290 aa14.29□□□□□ -0.12
SNRPA1-207ENST00000559309 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 NCF1BA6NI72 391 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 NCF1CA8MVU1 366 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 C2orf74A8MZ97 194 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 SUPT3HB4E1H0 165 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 E2F3O00716 465 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 GIPC1O14908 333 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 CAPN5O15484 640 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 PRAMEF4O60810 478 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 SUPT3HO75486 399 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 STK16O75716 305 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 FTH1P19P0C7X4 201 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 THRAP10827 490 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 NCF1P14598 390 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 HOXB3P14651 431 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 TYRP1P17643 537 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 POLR2CP19387 275 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 IMPDH1P20839 514 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 AGTR2P50052 363 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 GFERP55789 205 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 YBX1P67809 324 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 RELAQ04206 551 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 NAE1Q13564 534 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 PFKFB4Q16877 469 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 PRAMEF9Q5VWM5 478 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 CAPN13Q6MZZ7 669 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 LRRC70Q7Z2Q7 622 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 SLC22A9Q8IVM8 553 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 SYTL1Q8IYJ3 562 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 WDFY3Q8IZQ1 3526 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 FBXO39Q8N4B4 442 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 PTGR2Q8N8N7 351 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 Q8N9G6 341 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 ARMC2Q8NEN0 867 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 OR2L3Q8NG85 312 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 OR4K1Q8NGD4 311 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 KLHL6Q8WZ60 621 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 SLC22A18Q96BI1 424 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 WDR34Q96EX3 536 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 SCYL1Q96KG9 808 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 SARGQ9BW04 601 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 PCBD2Q9H0N5 130 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 ZBTB26Q9HCK0 441 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 CCDC177Q9NQR7 707 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 FAM53CQ9NYF3 392 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 TMEM9Q9P0T7 183 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 PCTPQ9UKL6 214 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 SH2B3Q9UQQ2 575 aa14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 TNPO3Q9Y5L0 923 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-207ENST00000559309 HEATR5BQ9P2D3 2071 aa14.27□□□□□ -0.12
SNRPA1-207ENST00000559309 IGHV5-10-1A0A0J9YXX1 117 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 TLCD2A6NGC4 264 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 H3BQF6 201 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 K7EPI3 171 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 BIRC5O15392 142 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 SMIM24O75264 130 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 SIX3O95343 332 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 BPGMP07738 259 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 MSL3P1P0C860 447 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 CPA3P15088 417 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 PSMB5P28074 263 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 CCKBRP32239 447 aa14.27□□□□□ -0.13
SNRPA1-207ENST00000559309 CASP2P42575 452 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms