RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MIPEPQ99797 713 aa10.5□□□□□ -0.73
TPM1-217ENST00000559108 CTRCQ99895 268 aa10.5□□□□□ -0.73
TPM1-217ENST00000559108 ZMYND15Q9H091 742 aa10.5□□□□□ -0.73
TPM1-217ENST00000559108 SPNS1Q9H2V7 528 aa10.5□□□□□ -0.73
TPM1-217ENST00000559108 ABCF3Q9NUQ8 709 aa10.5□□□□□ -0.73
TPM1-217ENST00000559108 XPR1Q9UBH6 696 aa10.5□□□□□ -0.73
TPM1-217ENST00000559108 LOXL2Q9Y4K0 774 aa10.5□□□□□ -0.73
TPM1-217ENST00000559108 IKBKGQ9Y6K9 419 aa10.5□□□□□ -0.73
TPM1-217ENST00000559108 CCDC187A0A096LP49 1063 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 A0A0J9YY10 115 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 IQANK1A0A1B0GTG1 560 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 TRABD2BA6NFA1 517 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 H3BMH7 237 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 KLK8O60259 260 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 CTSVO60911 334 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 CDH16O75309 829 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 RASSF9O75901 435 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 SASH3O75995 380 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 NELFEP18615 380 aaKnown RBP10.49□□□□□ -0.73
TPM1-217ENST00000559108 MAP4P27816 1152 aaKnown RBP10.49□□□□□ -0.73
TPM1-217ENST00000559108 OAS2P29728 719 aaKnown RBP10.49□□□□□ -0.73
TPM1-217ENST00000559108 GRIA3P42263 894 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 AP1S2P56377 157 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 CDKL1Q00532 357 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 SLC18A2Q05940 514 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 ILF2Q12905 390 aaKnown RBP10.49□□□□□ -0.73
TPM1-217ENST00000559108 TSTA3Q13630 321 aaPredicted RBP10.49□□□□□ -0.73
TPM1-217ENST00000559108 CASP8Q14790 479 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 KIR2DS3Q14952 304 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 ARHGAP19Q14CB8 494 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 GPR19Q15760 415 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 PTCHD3Q3KNS1 767 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 PRAMEF17Q5VTA0 474 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 ZNF425Q6IV72 752 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 KLHL35Q6PF15 583 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 TAOK1Q7L7X3 1001 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 RAB11FIP2Q7L804 512 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 GPSM1Q86YR5 675 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 KLHDC8AQ8IYD2 350 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 SYTL1Q8IYJ3 562 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 GALNT15Q8N3T1 639 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 PDPRQ8NCN5 879 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 MCOLN3Q8TDD5 553 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 SMPDL3AQ92484 453 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 GATA6Q92908 595 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 ALKBH8Q96BT7 664 aaKnown RBP10.49□□□□□ -0.73
TPM1-217ENST00000559108 MTBPQ96DY7 904 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 ZDHHC12Q96GR4 267 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 TMEM74Q96NL1 305 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 NMRAL1Q9HBL8 299 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 ASCL3Q9NQ33 180 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 FOXJ2Q9P0K8 574 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 CPSF2Q9P2I0 782 aaKnown RBP10.49□□□□□ -0.73
TPM1-217ENST00000559108 TLK1Q9UKI8 766 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 RNF112Q9ULX5 631 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 BTRCQ9Y297 605 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 NEUROG3Q9Y4Z2 214 aa10.49□□□□□ -0.73
TPM1-217ENST00000559108 EFCAB7A8K855 629 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 SUPT3HB4E1H0 165 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 C9orf172C9J069 976 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 PLD2O14939 933 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 SUPT3HO75486 399 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 SIX3O95343 332 aaPredicted RBP10.48□□□□□ -0.73
TPM1-217ENST00000559108 MED26O95402 600 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 NPPBP16860 134 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 ZNF28P17035 718 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 CDH3P22223 829 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 HSPA7P48741 367 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 GABREP78334 506 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 SHC2P98077 582 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 IFFO1Q0D2I5 559 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 PRKAA1Q13131 559 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 TRA2AQ13595 282 aaKnown RBP eCLIP10.48□□□□□ -0.73
TPM1-217ENST00000559108 ACAP2Q15057 778 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 SF1Q15637 639 aaKnown RBP10.48□□□□□ -0.73
TPM1-217ENST00000559108 KRT71Q3SY84 523 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 CEP85LQ5SZL2 805 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 PRAMEF13Q5VWM6 474 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 ICE2Q659A1 982 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 ARMC6Q6NXE6 501 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 TTC23LQ6PF05 361 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 FOXR1Q6PIV2 292 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 RPS27LQ71UM5 84 aaKnown RBP10.48□□□□□ -0.73
TPM1-217ENST00000559108 PLD3Q8IV08 490 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 D2HGDHQ8N465 521 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 DTWD1Q8N5C7 304 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 C19orf47Q8N9M1 422 aaKnown RBP10.48□□□□□ -0.73
TPM1-217ENST00000559108 RHEBL1Q8TAI7 183 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 MAGEC3Q8TD91 643 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 MED8Q96G25 268 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 CD180Q99467 661 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 CCDC77Q9BR77 488 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 RAB11FIP5Q9BXF6 653 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 CCDC177Q9NQR7 707 aaPredicted RBP10.48□□□□□ -0.73
TPM1-217ENST00000559108 C1GALT1Q9NS00 363 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 ZNF446Q9NWS9 450 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 PISDQ9UG56 409 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 LNPEPQ9UIQ6 1025 aa10.48□□□□□ -0.73
TPM1-217ENST00000559108 PTBP2Q9UKA9 531 aaKnown RBP10.48□□□□□ -0.73
TPM1-217ENST00000559108 PILRAQ9UKJ1 303 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms