RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ZFAND4Q86XD8 727 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 PPFIBP2Q8ND30 876 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 ZNF480Q8WV37 535 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 VPS33AQ96AX1 596 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 ROPN1LQ96C74 230 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 TOE1Q96GM8 510 aaKnown RBP12.56□□□□□ -0.4
SMAD3-207ENST00000558763 PPP3R2Q96LZ3 170 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 ABCD2Q9UBJ2 740 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 NDUFAF1Q9Y375 327 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 OR1A2Q9Y585 309 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 CROCCQ5TZA2 2017 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 CACNA1IQ9P0X4 2223 aa12.56□□□□□ -0.4
SMAD3-207ENST00000558763 SERTM1A2A2V5 107 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 FAM86C2PA6NEL3 165 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 PRORSD1PA6NEY8 169 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 E7EQ34 232 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 SLC28A1O00337 649 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 UGDHO60701 494 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 ZNF217O75362 1048 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 EEDO75530 441 aaKnown RBP12.55□□□□□ -0.4
SMAD3-207ENST00000558763 SLC22A3O75751 556 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 ANP32DO95626 131 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 SEMA4FO95754 770 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 PAK4O96013 591 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-207ENST00000558763 JUPP14923 745 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 JAK1P23458 1154 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 PRPH2P23942 346 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 GCKP35557 465 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 IGFALSP35858 605 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 PTDSS1P48651 473 aaKnown RBP12.55□□□□□ -0.4
SMAD3-207ENST00000558763 RPL38P63173 70 aaKnown RBP12.55□□□□□ -0.4
SMAD3-207ENST00000558763 RPS21P63220 83 aaKnown RBP12.55□□□□□ -0.4
SMAD3-207ENST00000558763 CHIT1Q13231 466 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 PTGR1Q14914 329 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 SGO1Q5FBB7 561 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 PAGE3Q5JUK9 113 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 WLSQ5T9L3 541 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 SUSD1Q6UWL2 747 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 LAYNQ6UX15 382 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 FAM156AQ8NDB6 213 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 ATL1Q8WXF7 558 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 SERPINI1Q99574 410 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 PREBQ9HCU5 417 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 NOP53Q9NZM5 478 aaKnown RBP12.55□□□□□ -0.4
SMAD3-207ENST00000558763 GMPR2Q9P2T1 348 aaKnown RBP12.55□□□□□ -0.4
SMAD3-207ENST00000558763 SH2B3Q9UQQ2 575 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 NEUROG3Q9Y4Z2 214 aa12.55□□□□□ -0.4
SMAD3-207ENST00000558763 FAM234BA2RU67 622 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 PABPN1LA6NDY0 278 aaKnown RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 PRR19A6NJB7 356 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 H3BNX3 289 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 AXIN1O15169 862 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 LAMTOR5O43504 91 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 RGS14O43566 566 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 IGLV3-19P01714 112 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 KRT6AP02538 564 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 KRT6BP04259 564 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 ME2P23368 584 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 KRT6CP48668 564 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 NEK2P51955 445 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 POLR2JP52435 117 aaKnown RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 PLOD1Q02809 727 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 RPS6KA2Q15349 733 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 KIAA1161Q6NSJ0 714 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 PDZD3Q86UT5 571 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 LRRTM4Q86VH4 590 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 LMNTD1Q8N9Z9 388 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 OR2T34Q8NGX1 318 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 WDR20Q8TBZ3 569 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 JADE3Q92613 823 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 STMN2Q93045 179 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 FOPNLQ96NB1 174 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 MYOCQ99972 504 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SGPP1Q9BX95 441 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 GPR174Q9BXC1 333 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 WDR26Q9H7D7 661 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 LRTM1Q9HBL6 345 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SGK2Q9HBY8 427 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 S100A14Q9HCY8 104 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SPAG4Q9NPE6 437 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 CROTQ9UKG9 612 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 VPS13AQ96RL7 3174 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 IGHV1OR15-9A0A0B4J2B8 117 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 LRRC72A6NJI9 287 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 C10orf142B7Z368 130 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 TRIM38O00635 465 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 NME4O00746 187 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 ANGPT2O15123 496 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 BCAS2O75934 225 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 ANPEPP15144 967 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SLC6A2P23975 617 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 CD6P30203 668 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 GNPDA1P46926 289 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 TBPL1P62380 186 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SLC34A1Q06495 639 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 RPA4Q13156 261 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 DOC2AQ14183 400 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 TIGD2Q4W5G0 525 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms