RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 BPHLQ86WA6 291 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 DTX1Q86Y01 620 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 OR2L3Q8NG85 312 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 OR2A1Q8NGT9 310 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 OR8K5Q8NH50 307 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 ZNF501Q96CX3 271 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 CCDC138Q96M89 665 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 ACAT2Q9BWD1 397 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 TRIM54Q9BYV2 358 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 FAM60AQ9NP50 221 aa11.9□□□□□ -0.5
SMAD3-205ENST00000558428 STOX2Q9P2F5 926 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 TMEM184BQ9Y519 407 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-205ENST00000558428 A0A087WUV0 522 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 CDC7O00311 574 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 TIAF1O95411 115 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 DLGAP3O95886 979 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 INHBAP08476 426 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 ENO2P09104 434 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 MSL3P1P0C860 447 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 ZNF28P17035 718 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 DEKP35659 375 aaKnown RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 GRIA3P42263 894 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 ATP1A2P50993 1020 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 PMS2P54278 862 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 AP1S2P56377 157 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 BMPR2Q13873 1038 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 ZKSCAN8Q15776 578 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 DEFB110Q30KQ9 67 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 THEMIS2Q5TEJ8 643 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 MROH9Q5TGP6 573 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 BROXQ5VW32 411 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 PWWP2BQ6NUJ5 590 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 SBSNQ6UWP8 590 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 RAPH1Q70E73 1250 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 CMC1Q7Z7K0 106 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 TMEM126BQ8IUX1 230 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 LRRC56Q8IYG6 542 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 CACNA2D3Q8IZS8 1091 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 NLGN4XQ8N0W4 816 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 EIF1ADQ8N9N8 165 aaKnown RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 NLGN4YQ8NFZ3 816 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 OR1L3Q8NH93 324 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 ANKRD7Q92527 254 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 NKD1Q969G9 470 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 FCRL4Q96PJ5 515 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 SPRY4Q9C004 299 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 UNKQ9C0B0 810 aaKnown RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 DERL2Q9GZP9 239 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 CHRNA10Q9GZZ6 450 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 MRPS30Q9NP92 439 aaKnown RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 ARL15Q9NXU5 204 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 CTNNAL1Q9UBT7 734 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 TAC3Q9UHF0 121 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 SERTAD3Q9UJW9 196 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 PILRAQ9UKJ1 303 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 IKZF3Q9UKT9 509 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 NOVA2Q9UNW9 492 aaKnown RBP11.89□□□□□ -0.51
SMAD3-205ENST00000558428 IKBKGQ9Y6K9 419 aa11.89□□□□□ -0.51
SMAD3-205ENST00000558428 TEX51A0A1B0GUA7 166 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 TARM1B6A8C7 271 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 POC1B-GALNT4F8VUJ3 575 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 RIPK2O43353 540 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 SCRG1O75711 98 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 CCNDBP1O95273 360 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 WISP3O95389 354 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-205ENST00000558428 GUCA1CO95843 209 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 NTRK1P04629 796 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 ABHD2P08910 425 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 CCDC166P0CW27 439 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 MYBL2P10244 700 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 TNFRSF8P28908 595 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 CRABP2P29373 138 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 MSH2P43246 934 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 GABRA4P48169 554 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 ITGA1P56199 1179 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 TBPL1P62380 186 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 YBX1P67809 324 aaKnown RBP11.88□□□□□ -0.51
SMAD3-205ENST00000558428 TLE3Q04726 772 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 CSHL1Q14406 222 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 NAA25Q14CX7 972 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 TSNQ15631 228 aaKnown RBP11.88□□□□□ -0.51
SMAD3-205ENST00000558428 PPP1R3AQ16821 1122 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 MANEAQ5SRI9 462 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 ICE2Q659A1 982 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 FCRL6Q6DN72 434 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 C19orf48Q6RUI8 117 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 AGTRAPQ6RW13 159 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 FRA10AC1Q70Z53 315 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 TIPARPQ7Z3E1 657 aaKnown RBP11.88□□□□□ -0.51
SMAD3-205ENST00000558428 ADAMTSL2Q86TH1 951 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 GPR135Q8IZ08 494 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 SPATA6LQ8N4H0 392 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 DNAJC22Q8N4W6 341 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 IL22RA1Q8N6P7 574 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 GALNT6Q8NCL4 622 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 SLC44A1Q8WWI5 657 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 ZUFSPQ96AP4 578 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 ALKBH8Q96BT7 664 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms