RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 NMRAL1Q9HBL8 299 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 CPNE5Q9HCH3 593 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 TRIM39Q9HCM9 518 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 MRGBPQ9NV56 204 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 PNPOQ9NVS9 261 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 PDP2Q9P2J9 529 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 PISDQ9UG56 409 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 FBXO5Q9UKT4 447 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 PRPF19Q9UMS4 504 aaKnown RBP10.03□□□□□ -0.8
TPM1-212ENST00000558347 SSUH2Q9Y2M2 353 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 RAP2CQ9Y3L5 183 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 KALRNO60229 2985 aa10.03□□□□□ -0.8
TPM1-212ENST00000558347 DPPA5A6NC42 116 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 GOLGA8TH3BQL2 631 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 CCL22O00626 93 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 CD3EAPO15446 510 aaKnown RBP10.02□□□□□ -0.8
TPM1-212ENST00000558347 KLK10O43240 276 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 SNX2O60749 519 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 C2P06681 752 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 JMJD7P0C870 316 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 MPSTP25325 297 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 GABRB3P28472 473 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 SLC5A2P31639 672 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 SLC1A2P43004 574 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 IRX1P78414 480 aaPredicted RBP10.02□□□□□ -0.8
TPM1-212ENST00000558347 HERC3Q15034 1050 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 TYSND1Q2T9J0 566 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.02□□□□□ -0.8
TPM1-212ENST00000558347 LIPMQ5VYY2 423 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 IYDQ6PHW0 289 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 ZC3HC1Q86WB0 502 aaKnown RBP10.02□□□□□ -0.8
TPM1-212ENST00000558347 PHYKPLQ8IUZ5 450 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 ZNF547Q8IVP9 402 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 CPSF7Q8N684 471 aaKnown RBP10.02□□□□□ -0.8
TPM1-212ENST00000558347 VPS39Q96JC1 886 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 TRAPPC9Q96Q05 1148 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 VPS35Q96QK1 796 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 ECSITQ9BQ95 431 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 DPH1Q9BZG8 443 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 FAM192AQ9GZU8 254 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 DRC3Q9H069 523 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 ILKAPQ9H0C8 392 aaPredicted RBP10.02□□□□□ -0.8
TPM1-212ENST00000558347 IL26Q9NPH9 171 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 PRDM8Q9NQV8 689 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 CATSPERZQ9NTU4 200 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 OXSMQ9NWU1 459 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 TMEM9Q9P0T7 183 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 SCHIP1Q9P0W5 487 aaPredicted RBP10.02□□□□□ -0.8
TPM1-212ENST00000558347 MARCH4Q9P2E8 410 aaPredicted RBP10.02□□□□□ -0.8
TPM1-212ENST00000558347 SLC23A2Q9UGH3 650 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 FKBPLQ9UIM3 349 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 TLK1Q9UKI8 766 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 PCDHGA7Q9Y5G6 932 aa10.02□□□□□ -0.8
TPM1-212ENST00000558347 TRBV5-4A0A0C4DH59 114 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 GOLGA8QA0A0J9YX86 632 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 IGHV5-10-1A0A0J9YXX1 117 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 GOLGA8OA6NCC3 632 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 OR51F1A6NGY5 319 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 AGAP14A8MT82 685 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 GOLGA8NF8WBI6 632 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 GAPDHSO14556 408 aaPredicted RBP10.02□□□□□ -0.81
TPM1-212ENST00000558347 S1PR4O95977 384 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 AHSGP02765 367 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 THRAP10827 490 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 COX4I1P13073 169 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 F3P13726 295 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 ITGAXP20702 1163 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 ARRB2P32121 409 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 MC4RP32245 332 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 SERPINB5P36952 375 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 SPAM1P38567 509 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CD151P48509 253 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CLCN2P51788 898 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 KPNA2P52292 529 aaKnown RBP10.02□□□□□ -0.81
TPM1-212ENST00000558347 MAPK10P53779 464 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 HHEXQ03014 270 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CACNG1Q06432 222 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 KLF10Q13118 480 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 PRKAA1Q13131 559 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CLN3Q13286 438 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CTBP1Q13363 440 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 NFATC2Q13469 925 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 GPR33Q49SQ1 333 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 AARS2Q5JTZ9 985 aaKnown RBP10.02□□□□□ -0.81
TPM1-212ENST00000558347 CERS6Q6ZMG9 384 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CMC1Q7Z7K0 106 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 SDCCAG8Q86SQ7 713 aaPredicted RBP10.02□□□□□ -0.81
TPM1-212ENST00000558347 DHDDSQ86SQ9 333 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 LRRTM4Q86VH4 590 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 DENND6AQ8IWF6 608 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 PLD6Q8N2A8 252 aaKnown RBP10.02□□□□□ -0.81
TPM1-212ENST00000558347 TMEM159Q96B96 161 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CLPTM1LQ96KA5 538 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CCDC74BQ96LY2 380 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 SLC38A3Q99624 504 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 CMKLR1Q99788 373 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 COG4Q9H9E3 785 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 SARS2Q9NP81 518 aaKnown RBP10.02□□□□□ -0.81
TPM1-212ENST00000558347 INTS10Q9NVR2 710 aaKnown RBP10.02□□□□□ -0.81
TPM1-212ENST00000558347 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms