RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RUFY3Q7L099 469 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SLC16A9Q7RTY1 509 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 AMIGO2Q86SJ2 522 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CTAGE6Q86UF2 777 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 ADGRG3Q86Y34 549 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 MISPQ8IVT2 679 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 LAX1Q8IWV1 398 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CTAGE4Q8IX94 777 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 LRRC56Q8IYG6 542 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 THEM5Q8N1Q8 247 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 AADATQ8N5Z0 425 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 THAP8Q8NA92 274 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SLC44A5Q8NCS7 719 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 OR10T2Q8NGX3 314 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 HMGCLL1Q8TB92 370 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SLC20A1Q8WUM9 679 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 FCGR1BQ92637 280 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 GGHQ92820 318 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 DHX58Q96C10 678 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 PYCR2Q96C36 320 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 PGM2Q96G03 612 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 TTC25Q96NG3 672 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 LRFN5Q96NI6 719 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 QRFPRQ96P65 431 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 CDK5RAP1Q96SZ6 601 aaKnown RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 TIMP4Q99727 224 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 PRRX2Q99811 253 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 WDR77Q9BQA1 342 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 PIGQQ9BRB3 760 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 TBCDQ9BTW9 1192 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SLC2A11Q9BYW1 496 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 PANK2Q9BZ23 570 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 NMNAT2Q9BZQ4 307 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 TMEM117Q9H0C3 514 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 TRPV6Q9H1D0 765 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 GORASP2Q9H8Y8 452 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 RAB9BQ9NP90 201 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 GKN1Q9NS71 199 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 MIOSQ9NXC5 875 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 DONSONQ9NYP3 566 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 NDUFA13Q9P0J0 144 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SLC17A6Q9P2U8 582 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SERGEFQ9UGK8 458 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 FAM153AQ9UHL3 310 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 NOCTQ9UK39 431 aaKnown RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 PTBP2Q9UKA9 531 aaKnown RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 MGAT4BQ9UQ53 548 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SH3GLB1Q9Y371 365 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 JRKLQ9Y4A0 524 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 TESMINQ9Y4I5 508 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 SPIN1Q9Y657 262 aaPredicted RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 PFASO15067 1338 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 ATXN2Q99700 1313 aaKnown RBP3.61□□□□□ -1.83
TDP1-217ENST00000557782 HEG1Q9ULI3 1381 aa3.61□□□□□ -1.83
TDP1-217ENST00000557782 C15orf38-AP3S2A0A0A6YYH1 394 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 MED19A0JLT2 244 aaPredicted RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 SLC15A5A6NIM6 579 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 LRRC3CA6NJW4 275 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 C2orf81A6NN90 581 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 C15orf62A8K5M9 175 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 PRSS46E5RG02 174 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 H0YC42 278 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 FOXN1O15353 648 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 PSMD3O43242 534 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SCO2O43819 266 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SNX3O60493 162 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 GMNNO75496 209 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 MFN2O95140 757 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 VNN2O95498 520 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CCDC159P0C7I6 412 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SP9P0CG40 484 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SMIM18P0DKX4 95 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CHRNB1P11230 501 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 TNNI3P19429 210 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 WT1P19544 449 aaPredicted RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 GPD1P21695 349 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 FBLP22087 321 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 CASQ1P31415 396 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 OTX2P32243 289 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 MMP13P45452 471 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 MTIF2P46199 727 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 NUMBP49757 651 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 RARRES1P49788 294 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CLCNKAP51800 687 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 P2RX3P56373 397 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 TUBA4AP68366 448 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CCZ1BP86790 482 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CCZ1P86791 482 aaPredicted RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 MAT1AQ00266 395 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 BEX3Q00994 111 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 HSF2Q03933 536 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SLC3A1Q07837 685 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CRYZQ08257 329 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 PNRC1Q12796 327 aaPredicted RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 FOXI1Q12951 378 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 SNTB2Q13425 540 aaKnown RBP3.6□□□□□ -1.83
TDP1-217ENST00000557782 TMED1Q13445 227 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 CUL2Q13617 745 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 KRT31Q15323 416 aa3.6□□□□□ -1.83
TDP1-217ENST00000557782 EFNB3Q15768 340 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms