RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RFXANKO14593 260 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 TBX1O43435 398 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 ASNA1O43681 348 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 RFPL2O75678 378 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 RHOCP08134 193 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 RPS3P23396 243 aaKnown RBP eCLIP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 PTPN6P29350 595 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 GNASQ5JWF2 1037 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 SERPINA11Q86U17 422 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 SLC7A5P1Q8MH63 180 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 PYCR2Q96C36 320 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 MTFMTQ96DP5 389 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 SIGLEC11Q96RL6 698 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 PITX2Q99697 317 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 GPR63Q9BZJ6 419 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 EHD1Q9H4M9 534 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF408Q9H9D4 720 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 AASDHPPTQ9NRN7 309 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 KLHL3Q9UH77 587 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 IFT52Q9Y366 437 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 TESMINQ9Y4I5 508 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 A3GALT2U3KPV4 340 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 SCN10AQ9Y5Y9 1956 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 PABPN1LA6NDY0 278 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 DIRAS1O95057 198 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 PTTG1O95997 202 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 RPLP2P05387 115 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 CDKN2CP42773 168 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 RPS24P62847 133 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 RPP38P78345 283 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 NPRL3Q12980 569 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 SYT16Q17RD7 645 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 STEAP3Q658P3 488 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 CXCL17Q6UXB2 119 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 USP43Q70EL4 1123 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 SERPINA9Q86WD7 417 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF280BQ86YH2 543 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 AMER2Q8N7J2 671 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 BEND7Q8N7W2 519 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 PROX1Q92786 737 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 ACPTQ9BZG2 426 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 C6orf62Q9GZU0 229 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 REEP1Q9H902 201 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 ZBTB20Q9HC78 741 aaPredicted RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 MOV10Q9HCE1 1003 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 DLGAP4Q9Y2H0 992 aa11.51□□□□□ -0.57
VIPAS39-211ENST00000557658 ILVBLA1L0T0 632 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 H3BNC9 293 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 B4GALT3O60512 393 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 CLDN11O75508 207 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 SLC25A14O95258 325 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 FKBP9O95302 570 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 CLDN9O95484 217 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 EPHA2P29317 976 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 LIPAP38571 399 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 CTSKP43235 329 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 SLC11A2P49281 568 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 SEPHS1P49903 392 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 CREMQ03060 361 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ELP6Q0PNE2 266 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 TWF1Q12792 350 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 CTXN3Q4LDR2 81 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ZCCHC8Q6NZY4 707 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF598Q86UK7 904 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 CCDC71Q8IV32 467 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 P3H2Q8IVL5 708 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 RBFAQ8N0V3 343 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 TESCQ96BS2 214 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 TSSK3Q96PN8 268 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 MYOCQ99972 504 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 COPS4Q9BT78 406 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 RNF6Q9Y252 685 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 PLXNA4Q9HCM2 1894 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 PCDHGA12O60330 932 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 STK16O75716 305 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 SEMG1P04279 462 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 PCSK2P16519 638 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 PTPN2P17706 415 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 MAPK1P28482 360 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 S100A5P33763 92 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 OR1G1P47890 313 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ARPP19P56211 112 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 VLDLRP98155 873 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF45Q02386 682 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF177Q13360 481 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 CPSF6Q16630 551 aaKnown RBP eCLIP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 VMACQ2NL98 169 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 PNCKQ6P2M8 343 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ERICH5Q6P6B1 374 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 GLB1LQ6UWU2 654 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 MSANTD1Q6ZTZ1 278 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ZNF551Q7Z340 670 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 ZBTB2Q8N680 514 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 LKAAEAR1Q8TD35 194 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 NELL1Q92832 810 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 CCDC97Q96F63 343 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms