RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ANKRD7Q92527 254 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 TSPAN17Q96FV3 270 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 CRELD1Q96HD1 420 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 LRFN5Q96NI6 719 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 FMO2Q99518 471 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 RBBP8Q99708 897 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 MCMBPQ9BTE3 642 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 FAM60AQ9NP50 221 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 UTP6Q9NYH9 597 aaKnown RBP12.02□□□□□ -0.49
SLIRP-209ENST00000557342 ANKMY1Q9P2S6 941 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 PLCL2Q9UPR0 1127 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 KLK4Q9Y5K2 254 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 AP1M2Q9Y6Q5 423 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 SPTBP11277 2137 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 EPG5Q9HCE0 2579 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 AHCTF1Q8WYP5 2266 aa12.02□□□□□ -0.49
SLIRP-209ENST00000557342 MDC1Q14676 2089 aaKnown RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 ZFHX4Q86UP3 3567 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 LOC101059948A0A1B0GTJ6 334 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 KRT87PA6NCN2 255 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 CXorf49A8MYA2 514 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 OR2B3O76000 313 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 TSPAN12O95859 305 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 ENO2P09104 434 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 ZNF37AP17032 561 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 SPRP35270 261 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 GRIA3P42263 894 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 AP1S2P56377 157 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 TAS2R39P59534 338 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 MC1RQ01726 317 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 RHDQ02161 417 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 SRSF6Q13247 344 aaKnown RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 TSTA3Q13630 321 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 KBTBD12Q3ZCT8 623 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 KIAA1614Q5VZ46 1190 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 TLDC1Q6P9B6 456 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 FAM20CQ8IXL6 584 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 CLIP3Q96DZ5 547 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 SLC45A3Q96JT2 553 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 MIPEPQ99797 713 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 PCBD2Q9H0N5 130 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 ACTR5Q9H9F9 607 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 MRPS30Q9NP92 439 aaKnown RBP12.01□□□□□ -0.49
SLIRP-209ENST00000557342 LHX9Q9NQ69 397 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 IRAK4Q9NWZ3 460 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 KCND3Q9UK17 655 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 ADAMTS6Q9UKP5 1117 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 PDE10AQ9Y233 779 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 PCDHGA4Q9Y5G9 962 aa12.01□□□□□ -0.49
SLIRP-209ENST00000557342 PTPRQQ9UMZ3 2332 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 ZNF891A8MT65 544 aaPredicted RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 C21orf140B9A014 251 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 E7ENX8 843 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 CCND1P24385 295 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 PSMB5P28074 263 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 IMPA1P29218 277 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 DLSTP36957 453 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 GABRA4P48169 554 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 ABATP80404 500 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 TAP2Q03519 686 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 PRDX1Q06830 199 aaKnown RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 USP10Q14694 798 aaKnown RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 DEFB110Q30KQ9 67 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 TCTE1Q5JU00 501 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 THEMIS2Q5TEJ8 643 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 ICE2Q659A1 982 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 FCRL6Q6DN72 434 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 SUSD1Q6UWL2 747 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 MCATQ8IVS2 390 aaKnown RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 IFT20Q8IY31 132 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 PPM1NQ8N819 430 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 PPFIBP2Q8ND30 876 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 ATL1Q8WXF7 558 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 DLG3Q92796 817 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 GPR22Q99680 433 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 DPH2Q9BQC3 489 aaPredicted RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 ACAT2Q9BWD1 397 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 FAM117AQ9C073 453 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 GPAMQ9HCL2 828 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 RRAGDQ9NQL2 400 aaPredicted RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 CCDC177Q9NQR7 707 aaPredicted RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 EURLQ9NYK6 297 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 STOX2Q9P2F5 926 aaPredicted RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 TAC3Q9UHF0 121 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 CROTQ9UKG9 612 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 NOVA2Q9UNW9 492 aaKnown RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 SRPK3Q9UPE1 567 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 KLHL20Q9Y2M5 609 aa12□□□□□ -0.49
SLIRP-209ENST00000557342 MTO1Q9Y2Z2 717 aaKnown RBP12□□□□□ -0.49
SLIRP-209ENST00000557342 CELSR3Q9NYQ7 3312 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 MEN1O00255 615 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 ZSCAN9O15535 394 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-209ENST00000557342 ZNF749O43361 778 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 SRPX2O60687 465 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-209ENST00000557342 PIAS1O75925 651 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 C1QAP02745 245 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 STMN1P16949 149 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 TCN2P20062 427 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 AGXTP21549 392 aa11.99□□□□□ -0.49
SLIRP-209ENST00000557342 HRH2P25021 359 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms