RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 C9orf172C9J069 976 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 CAPNS1P04632 268 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 HIST1H2AGP0C0S8 130 aaPredicted RBP20.15■□□□□ 0.82
SEC23A-213ENST00000557280 NCF1P14598 390 aaPredicted RBP20.15■□□□□ 0.82
SEC23A-213ENST00000557280 HIST1H2ADP20671 130 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 RPA3P35244 121 aaPredicted RBP20.15■□□□□ 0.82
SEC23A-213ENST00000557280 HSD17B2P37059 387 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 SLC26A3P40879 764 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 TSPAN7P41732 249 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 AP1S2P56377 157 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 HSD11B2P80365 405 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 NAE1Q13564 534 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 GPR19Q15760 415 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 UNQ6494/PRO21346Q6UXR6 183 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 CDHR3Q6ZTQ4 885 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 KMT5CQ86Y97 462 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 CYP4X1Q8N118 509 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 CARFQ8N187 725 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 USP7Q93009 1102 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 SLC22A18Q96BI1 424 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 ALKBH8Q96BT7 664 aaKnown RBP20.15■□□□□ 0.82
SEC23A-213ENST00000557280 PYCR2Q96C36 320 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 FBXL8Q96CD0 374 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 MED8Q96G25 268 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 HIST1H2AHQ96KK5 128 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 OR6C1Q96RD1 312 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 HIST1H2AJQ99878 128 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 CCDC77Q9BR77 488 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 H2AFJQ9BTM1 129 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 SLC39A1Q9NY26 324 aa20.15■□□□□ 0.82
SEC23A-213ENST00000557280 IGKV1-8A0A0C4DH67 115 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 CDRT15L2A8MXV6 281 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 DXOO77932 396 aaKnown RBP20.14■□□□□ 0.81
SEC23A-213ENST00000557280 MLLT3P42568 568 aaPredicted RBP20.14■□□□□ 0.81
SEC23A-213ENST00000557280 ARL4DP49703 201 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 FOXK2Q01167 660 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 MC2RQ01718 297 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 FOXM1Q08050 763 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 TGFBIQ15582 683 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 DEFB110Q30KQ9 67 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 FBXO48Q5FWF7 155 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 FCRL6Q6DN72 434 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 IGF2-ASQ6U949 168 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 TIFABQ6ZNK6 161 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 CLEC14AQ86T13 490 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 TDRPQ86YL5 185 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 GPSM1Q86YR5 675 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 ATOH8Q96SQ7 321 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 EGFL8Q99944 293 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 TRIM54Q9BYV2 358 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 NMRAL1Q9HBL8 299 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 CCDC177Q9NQR7 707 aaPredicted RBP20.14■□□□□ 0.81
SEC23A-213ENST00000557280 PCMTD2Q9NV79 361 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 PCDHB11Q9Y5F2 797 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 B3GALT1Q9Y5Z6 326 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 FREM2Q5SZK8 3169 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 ANKRD12Q6UB98 2062 aa20.14■□□□□ 0.81
SEC23A-213ENST00000557280 IQANK1A0A1B0GTG1 560 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 PABPN1LA6NDY0 278 aaKnown RBP20.13■□□□□ 0.81
SEC23A-213ENST00000557280 ZNF839A8K0R7 811 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 KLHL2O95198 593 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 TUBBP07437 444 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 CTSBP07858 339 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 GRIA3P42263 894 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 CDKL1Q00532 357 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 TUBB3Q13509 450 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 PRAMEF13Q5VWM6 474 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 ICE2Q659A1 982 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 CCDC91Q7Z6B0 441 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 OR56A3Q8NH54 315 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 RHBDF1Q96CC6 855 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 MTBPQ96DY7 904 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 TMEM79Q9BSE2 394 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 SGPP1Q9BX95 441 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 CUEDC1Q9NWM3 386 aaPredicted RBP20.13■□□□□ 0.81
SEC23A-213ENST00000557280 RNF112Q9ULX5 631 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 PLAAQ9Y263 795 aa20.13■□□□□ 0.81
SEC23A-213ENST00000557280 A0A1W2PPM1 405 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 GOLGA8RI6L899 631 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 UBXN8O00124 270 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 KERAO60938 352 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 TIAF1O95411 115 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 RBMS1P29558 406 aaKnown RBP20.12■□□□□ 0.81
SEC23A-213ENST00000557280 SLC5A2P31639 672 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 GABRA4P48169 554 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 COL9A2Q14055 689 aaPredicted RBP20.12■□□□□ 0.81
SEC23A-213ENST00000557280 FAM83EQ2M2I3 478 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 TBC1D25Q3MII6 688 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 LGSNQ5TDP6 509 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 THEMIS2Q5TEJ8 643 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 FIGLAQ6QHK4 219 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 ZBTB9Q96C00 473 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 OR4K3Q96R72 315 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 TAAR9Q96RI9 348 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 PDE7BQ9NP56 450 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 FBXO8Q9NRD0 319 aa20.12■□□□□ 0.81
SEC23A-213ENST00000557280 INTS7Q9NVH2 962 aaKnown RBP20.12■□□□□ 0.81
SEC23A-213ENST00000557280 SUPT3HB4E1H0 165 aa20.11■□□□□ 0.81
SEC23A-213ENST00000557280 TAPBPO15533 448 aa20.11■□□□□ 0.81
SEC23A-213ENST00000557280 TLX3O43711 291 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms