RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PFDN6O15212 129 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 CTSVO60911 334 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 CBX6O95503 412 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 DDAH2O95865 285 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 ITGA3P26006 1051 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 MGAT1P26572 445 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 FMO4P31512 558 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 BDKRB1P46663 353 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 VSX2P58304 361 aaPredicted RBP15.21■□□□□ 0.03
TUBB3-213ENST00000557262 CCSMST1Q4G0I0 132 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 CRB2Q5IJ48 1285 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 CTSL3PQ5NE16 218 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 PRAMEF13Q5VWM6 474 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 MRNIPQ6NTE8 343 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 LRRC8BQ6P9F7 803 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 Q6ZS92 163 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 COX15Q7KZN9 410 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 OTUD6BQ8N6M0 293 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 OR2A1Q8NGT9 310 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.21■□□□□ 0.03
TUBB3-213ENST00000557262 MFSD3Q96ES6 412 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 TCF12Q99081 682 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 SPSB2Q99619 263 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 MIPEPQ99797 713 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 ZBTB20Q9HC78 741 aaPredicted RBP15.21■□□□□ 0.03
TUBB3-213ENST00000557262 SLC6A20Q9NP91 592 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 FBXL4Q9UKA2 621 aa15.21■□□□□ 0.03
TUBB3-213ENST00000557262 NXT1Q9UKK6 140 aaKnown RBP15.21■□□□□ 0.03
TUBB3-213ENST00000557262 COPG1Q9Y678 874 aaKnown RBP15.21■□□□□ 0.03
TUBB3-213ENST00000557262 NBPF19A0A087WUL8 3843 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 HYKKA2RU49 373 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 VSTM2BA6NLU5 285 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 H3BMM5 538 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 SOCS6O14544 535 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 MATN4O95460 622 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 FGGP02679 453 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 ARNTP27540 789 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 PSMB5P28074 263 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 OR1D4P47884 311 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 KCNJ1P48048 391 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 GLRBP48167 497 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 NR6A1Q15406 480 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 CNSTQ6PJW8 725 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 KIRREL2Q6UWL6 708 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 CES3Q6UWW8 571 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 OR2L3Q8NG85 312 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 VPS50Q96JG6 964 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 SEMA3GQ9NS98 782 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 HOMER3Q9NSC5 361 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 SYBUQ9NX95 663 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 SPATA7Q9P0W8 599 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 ZC3H7BQ9UGR2 993 aaKnown RBP15.2■□□□□ 0.02
TUBB3-213ENST00000557262 SOX13Q9UN79 622 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 RUVBL2Q9Y230 463 aaKnown RBP15.2■□□□□ 0.02
TUBB3-213ENST00000557262 HS3ST3B1Q9Y662 390 aa15.2■□□□□ 0.02
TUBB3-213ENST00000557262 LOC105369274A0A096LPK9 316 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 LOC102723532A0A0G2JNH3 316 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 A0A0J9YVX5 310 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 A0A1W2PPV9 198 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 ESR1P03372 595 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 TPSB2P20231 275 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 CHRM3P20309 590 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 ADARP55265 1226 aaKnown RBP15.19■□□□□ 0.02
TUBB3-213ENST00000557262 GBX1Q14549 363 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 TPSAB1Q15661 275 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 TYSND1Q2T9J0 566 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 RNF187Q5TA31 235 aaPredicted RBP15.19■□□□□ 0.02
TUBB3-213ENST00000557262 AGAP7PQ5VUJ5 663 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 IRAK1BP1Q5VVH5 260 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 HIST2H2BCQ6DN03 193 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 FRMPD2BQ6IN97 320 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 FBXO42Q6P3S6 717 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 ZNF662Q6ZS27 426 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 SHISA6Q6ZSJ9 500 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 PARP9Q8IXQ6 854 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 OR4N4Q8N0Y3 316 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 LPGAT1Q92604 370 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 INPP5DQ92835 1189 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 AGAP4Q96P64 663 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 SOX17Q9H6I2 414 aaPredicted RBP15.19■□□□□ 0.02
TUBB3-213ENST00000557262 ZNF304Q9HCX3 659 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 CRYL1Q9Y2S2 319 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 MAU2Q9Y6X3 613 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 FAM169AQ9Y6X4 670 aa15.19■□□□□ 0.02
TUBB3-213ENST00000557262 TCRBV7S3A2A0A539 114 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 KRT87PA6NCN2 255 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 GOLGA8KD6RF30 607 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 GOLGA8TH3BQL2 631 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 CEP104O60308 925 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 NIPSNAP2O75323 286 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 ATP5DP30049 168 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 CMPK1P30085 196 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 SARNPP82979 210 aaKnown RBP15.18■□□□□ 0.02
TUBB3-213ENST00000557262 OCA2Q04671 838 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 FASTKQ14296 549 aaKnown RBP15.18■□□□□ 0.02
TUBB3-213ENST00000557262 NAA25Q14CX7 972 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 RBBP7Q16576 425 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 TUBB8Q3ZCM7 444 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 ANKRD20A4Q4UJ75 823 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 ARMC3Q5W041 872 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms