RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ZMYND19Q96E35 227 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-245ENST00000556958 TCF12Q99081 682 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 FAM60AQ9NP50 221 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 HAUS2Q9NVX0 235 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 FAM8A1Q9UBU6 413 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF282Q9UDV7 671 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-245ENST00000556958 CFAP20Q9Y6A4 193 aaKnown RBP5.45□□□□□ -1.54
ATXN3-245ENST00000556958 A0A096LPE4 126 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 IGHV1-45A0A0A0MS14 117 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 TMEM238LA0A1B0GVL6 79 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 A0A1W2PPZ6 126 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 A0A1W2PQ72 361 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 MBD3L4A6NDZ8 208 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 MBD3L5A6NJ08 208 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 A8MV72 311 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 BECN2A8MW95 431 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 EIF3CLB5ME19 914 aaKnown RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 BTN3A3O00478 584 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 DSCR3O14972 297 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 CDC40O60508 579 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 MTX2O75431 263 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 LSM8O95777 96 aaKnown RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 ZGLP1P0C6A0 271 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 SLC35G4P0C7Q5 338 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 ACVR2AP27037 513 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 CDH5P33151 784 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 ME1P48163 572 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 DCDC1P59894 354 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 TMPRSS15P98073 1019 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 FANCCQ00597 558 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 LRRC63Q05C16 580 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 ITKQ08881 620 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 GRM7Q14831 915 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 MEP1AQ16819 746 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 HYAL4Q2M3T9 481 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 SPRED3Q2MJR0 410 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 GXYLT1Q4G148 440 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 RAB6CQ53S08 254 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 RESP18Q5W5W9 173 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 SARM1Q6SZW1 724 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 SPESP1Q6UW49 350 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 UNC5DQ6UXZ4 953 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 C12orf54Q6X4T0 127 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 AMIGO1Q86WK6 493 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 TMTC1Q8IUR5 882 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 INTS1Q8N201 2190 aaKnown RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 STT3BQ8TCJ2 826 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 TMEM125Q96AQ2 219 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 PERPQ96FX8 193 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 EIF3CQ99613 913 aaKnown RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 TTYH2Q9BSA4 534 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 CCM2Q9BSQ5 444 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 TUBB6Q9BUF5 446 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 NUP85Q9BW27 656 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 BEX2Q9BXY8 128 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 WWP1Q9H0M0 922 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 RAB6CQ9H0N0 254 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 TFB2MQ9H5Q4 396 aaKnown RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 NLRC4Q9NPP4 1024 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 METTL5Q9NRN9 209 aaKnown RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 CUTCQ9NTM9 273 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 EURLQ9NYK6 297 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 ACTR10Q9NZ32 417 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 CTSFQ9UBX1 484 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 MTRF1LQ9UGC7 380 aaKnown RBP5.44□□□□□ -1.54
ATXN3-245ENST00000556958 FZD10Q9ULW2 581 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 GTF3C1Q12789 2109 aa5.44□□□□□ -1.54
ATXN3-245ENST00000556958 ZANQ9Y493 2812 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 NBEAL2Q6ZNJ1 2754 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 A0A0G2JNJ9 132 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 MGAT4DA6NG13 374 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 C2CD4BA6NLJ0 364 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 KLRC4-KLRK1H3BQV0 150 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 EEF2KO00418 725 aaKnown RBP5.43□□□□□ -1.54
ATXN3-245ENST00000556958 BTN3A1O00481 513 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 BCKDKO14874 412 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 CASKO14936 926 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 CD5LO43866 347 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 HRGP04196 525 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 CYP1A1P04798 512 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-245ENST00000556958 HEXBP07686 556 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 KRT3P12035 628 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 TFEBP19484 476 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 TACR1P25103 407 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 GSTT1P30711 240 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 MMP13P45452 471 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 OR1D4P47884 311 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 GABRA4P48169 554 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 GP2P55259 537 aaKnown RBP5.43□□□□□ -1.54
ATXN3-245ENST00000556958 MAXP61244 160 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 KRTAP1-1Q07627 177 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 NFE2L1Q14494 772 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 RABEP1Q15276 862 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 DEFB110Q30KQ9 67 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 TCTE1Q5JU00 501 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 UBAP2Q5T6F2 1119 aaKnown RBP5.43□□□□□ -1.54
ATXN3-245ENST00000556958 ERICH6BQ5W0A0 696 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 ALS2CLQ60I27 953 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 PRMT9Q6P2P2 845 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 TMEM220Q6QAJ8 160 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms