RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 ST6GALNAC6Q969X2 333 aa3.43□□□□□ -1.86
GPHN-214ENST00000556633 EXOC4Q96A65 974 aa3.43□□□□□ -1.86
GPHN-214ENST00000556633 ERO1AQ96HE7 468 aa3.43□□□□□ -1.86
GPHN-214ENST00000556633 INPP4AQ96PE3 977 aaPredicted RBP3.43□□□□□ -1.86
GPHN-214ENST00000556633 PANK2Q9BZ23 570 aa3.43□□□□□ -1.86
GPHN-214ENST00000556633 ALDH8A1Q9H2A2 487 aaPredicted RBP3.43□□□□□ -1.86
GPHN-214ENST00000556633 CHMP4BQ9H444 224 aaKnown RBP3.43□□□□□ -1.86
GPHN-214ENST00000556633 GSN-AS1Q9NRJ2 163 aa3.43□□□□□ -1.86
GPHN-214ENST00000556633 FGF21Q9NSA1 209 aa3.43□□□□□ -1.86
GPHN-214ENST00000556633 STUB1Q9UNE7 303 aa3.43□□□□□ -1.86
GPHN-214ENST00000556633 KCNK7Q9Y2U2 307 aa3.43□□□□□ -1.86
GPHN-214ENST00000556633 TCF20Q9UGU0 1960 aaKnown RBP3.43□□□□□ -1.86
GPHN-214ENST00000556633 TRAV24A0A0B4J272 114 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 A0A1W2PPW3 197 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 ATP6AP2O75787 350 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 LUC7L3O95232 432 aaKnown RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 FRMD6-AS1P0C7T7 363 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 CASTP20810 708 aaKnown RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 CD27P26842 260 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 CEACAM8P31997 349 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 WNT5AP41221 380 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 RGS7P49802 495 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 ALDH3A2P51648 485 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 VAMP7P51809 220 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 CLDN15P56746 228 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 LINC01547P58512 204 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 PTENP60484 403 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 KLC1Q07866 573 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 ILF2Q12905 390 aaKnown RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 TNK1Q13470 666 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 PTGISQ16647 500 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 FAM174BQ3ZCQ3 159 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 SLC35E4Q6ICL7 350 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 TMEM182Q6ZP80 229 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 MSANTD1Q6ZTZ1 278 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 NRARPQ7Z6K4 114 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 DZIP1Q86YF9 867 aaKnown RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 KLHL7Q8IXQ5 586 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 NDUFAF2Q8N183 169 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 KBTBD8Q8NFY9 601 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 OR52N5Q8NH56 324 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 GRAPLQ8TC17 118 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 RAD54LQ92698 747 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 SENP5Q96HI0 755 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 UHRF2Q96PU4 802 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 NODALQ96S42 347 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 SNX25Q9H3E2 840 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 TLE6Q9H808 572 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 TRPV4Q9HBA0 871 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 FAM207AQ9NSI2 230 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 ADPRHL2Q9NX46 363 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 DDX43Q9NXZ2 648 aaKnown RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 ERAP1Q9NZ08 941 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 PRDM4Q9UKN5 801 aa3.42□□□□□ -1.86
GPHN-214ENST00000556633 ZFP37Q9Y6Q3 630 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 CENPJQ9HC77 1338 aaPredicted RBP3.42□□□□□ -1.86
GPHN-214ENST00000556633 IFITM10A6NMD0 228 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 C2orf81A6NN90 581 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 SMIM1B2RUZ4 78 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 PRSS44E7EML9 344 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 ZNF197O14709 1029 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 SLC7A4O43246 635 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 SNX3O60493 162 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 ZNF432O94892 652 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 PGLSO95336 258 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 SUPT20HL2P0C7V6 817 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 IGHV4-31P0DP07 118 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 SPP1P10451 314 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 LBPP18428 481 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 CA6P23280 308 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 CSTF2P33240 577 aaKnown RBP eCLIP3.41□□□□□ -1.865e-7■■■■□ 25.7
GPHN-214ENST00000556633 RPL21P46778 160 aaKnown RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 GMPSP49915 693 aaPredicted RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 MAZP56270 477 aaKnown RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 TUBB4BP68371 445 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 RASGEF1BQ0VAM2 473 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 HNRNPA0Q13151 305 aaKnown RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 GPR17Q13304 367 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 HERC3Q15034 1050 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 NONOQ15233 471 aaKnown RBP eCLIP3.41□□□□□ -1.861e-6■■■■□ 22.7
GPHN-214ENST00000556633 TWISTNBQ3B726 338 aaPredicted RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 NHSL2Q5HYW2 709 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 C11orf88Q6PI97 169 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 CEACAM20Q6UY09 585 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 MARK2Q7KZI7 788 aaKnown RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 DCUN1D3Q8IWE4 304 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 NOA1Q8NC60 698 aaKnown RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 OR10Q1Q8NGQ4 319 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 GDAP1Q8TB36 358 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 TRIM44Q96DX7 344 aaPredicted RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 VMP1Q96GC9 406 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 CCDC3Q9BQI4 270 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 DESI2Q9BSY9 194 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 ZMYND12Q9H0C1 365 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 COPS7BQ9H9Q2 264 aaPredicted RBP3.41□□□□□ -1.86
GPHN-214ENST00000556633 LMAN1LQ9HAT1 526 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 SIX2Q9NPC8 291 aa3.41□□□□□ -1.86
GPHN-214ENST00000556633 P4HTMQ9NXG6 502 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms