RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 OSGEPL1Q9H4B0 414 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 UGT1A7Q9HAW7 530 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 UGT1A10Q9HAW8 530 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 UGT1A8Q9HAW9 530 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 USP29Q9HBJ7 922 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 MAGEE1Q9HCI5 957 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 HOMER3Q9NSC5 361 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 DLL3Q9NYJ7 618 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 SMARCAL1Q9NZC9 954 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 TTC7AQ9ULT0 858 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-238ENST00000556288 PYCARDQ9ULZ3 195 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 RPL26L1Q9UNX3 145 aaKnown RBP4.59□□□□□ -1.67
ATXN3-238ENST00000556288 PLEKHM1Q9Y4G2 1056 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 PCDHGB2Q9Y5G2 931 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 ARL5AQ9Y689 179 aa4.59□□□□□ -1.67
ATXN3-238ENST00000556288 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.59□□□□□ -1.67
ATXN3-238ENST00000556288 USP34Q70CQ2 3546 aa4.59□□□□□ -1.68
ATXN3-238ENST00000556288 MDC1Q14676 2089 aaKnown RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 SCN3AQ9NY46 2000 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 GOLGA6L10A0A0M3HER8 536 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 LOC285095A0A1B0GVY8 99 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CTAGE9A4FU28 777 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 GOLGA8MH3BSY2 632 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PSMD11O00231 422 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CCL22O00626 93 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 TRIM38O00635 465 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 TOR1BO14657 336 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MTX2O75431 263 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 KRT14P02533 472 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 FGF1P05230 155 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PYGLP06737 847 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 APRTP07741 180 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CKMT2P17540 419 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 GM2AP17900 193 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 HLA-DPA1P20036 260 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MSH3P20585 1137 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 ACRV1P26436 265 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 AK4P27144 223 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 EPHA8P29322 1005 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 ALDH4A1P30038 563 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PBLDP30039 288 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 AKT1P31749 480 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 RPL22P35268 128 aaKnown RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 FDFT1P37268 417 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PAFAH1B1P43034 410 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MAPK9P45984 424 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 SLC6A9P48067 706 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 RXRGP48443 463 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MAN2A2P49641 1150 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 STC1P52823 247 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CLDN6P56747 220 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PFN3P60673 137 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CDK3Q00526 305 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 ILF3Q12906 894 aaKnown RBP eCLIP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 GPS1Q13098 491 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 POU6F1Q14863 301 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PPP1R7Q15435 360 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CHRNA6Q15825 494 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CCNG2Q16589 344 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 INSCQ1MX18 579 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 ALG11Q2TAA5 492 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 P3H1Q32P28 736 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 AMZ1Q400G9 498 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CCDC38Q502W7 563 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 ANKS6Q68DC2 871 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CASC4Q6P4E1 433 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CCDC137Q6PK04 289 aaKnown RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 DHRS13Q6UX07 377 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MACC1Q6ZN28 852 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 DET1Q7L5Y6 550 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 EFL1Q7Z2Z2 1120 aaKnown RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 SPRED1Q7Z699 444 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PIP4P1Q86T03 277 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 LINC00523Q86TU6 105 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 GALNT13Q8IUC8 556 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 KLHL7Q8IXQ5 586 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 OTUD6BQ8N6M0 293 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 ZNF548Q8NEK5 533 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 OR4K2Q8NGD2 314 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 OR52K1Q8NGK4 314 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CCL4L1Q8NHW4 92 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 SLC35B2Q8TB61 432 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MAPK15Q8TD08 544 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 ZNF398Q8TD17 642 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 UBE2Q2Q8WVN8 375 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 HDAC10Q969S8 669 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 DCUN1D1Q96GG9 259 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 PPP1R2P1Q96PQ5 205 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MCCC1Q96RQ3 725 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 TRIB3Q96RU7 358 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 OSBPL9Q96SU4 736 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 NAP1L3Q99457 506 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MNTQ99583 582 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 NAPGQ99747 312 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 GPR87Q9BY21 358 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 FRMD8P1Q9BZ68 369 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CLPBQ9H078 707 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 CARD9Q9H257 536 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 ASB8Q9H765 288 aa4.58□□□□□ -1.68
ATXN3-238ENST00000556288 MANSC1Q9H8J5 431 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms