RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 CFAP61Q8NHU2 1237 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 PPP4R1Q8TF05 950 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 SNRNP40Q96DI7 357 aaKnown RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 BIRC8Q96P09 236 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 SPSB2Q99619 263 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 DESI2Q9BSY9 194 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 AGPAT4Q9NRZ5 378 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 IRAK4Q9NWZ3 460 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 GUCA1BQ9UMX6 200 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 SOX13Q9UN79 622 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 COPG1Q9Y678 874 aaKnown RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 USP9XQ93008 2570 aaPredicted RBP7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 SHANK1Q9Y566 2161 aa7.46□□□□□ -1.22
PTCSC3-201ENST00000556013 A0A0U1RQJ8 604 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 A0A1W2PQ72 361 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 HYKKA2RU49 373 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 OR2A25A4D2G3 310 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 EIF3FO00303 357 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 PRPF4O43172 522 aaKnown RBP eCLIP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 CYC1P08574 325 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 ERGP11308 486 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 PKMP14618 531 aaKnown RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 CMPK1P30085 196 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 TSFMP43897 325 aaKnown RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 SESN2P58004 480 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 AP2B1P63010 937 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 ABATP80404 500 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 OCA2Q04671 838 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 SNX1Q13596 522 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 EIF2S3LQ2VIR3 472 aaKnown RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 DEFB110Q30KQ9 67 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 WASHC2DQ5SRD0 308 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 FAM69BQ5VUD6 431 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 AGAP7PQ5VUJ5 663 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 IRAK1BP1Q5VVH5 260 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 ATG9BQ674R7 924 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 B3GNTL1Q67FW5 361 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 KIAA0930Q6ICG6 404 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 KIRREL2Q6UWL6 708 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 RNF44Q7L0R7 432 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 KRT222Q8N1A0 295 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 TAB3Q8N5C8 712 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 OR2L3Q8NG85 312 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 OR9A1PQ8NGU1 263 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 SMPDL3AQ92484 453 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 MFSD3Q96ES6 412 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 AGAP4Q96P64 663 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 WDR77Q9BQA1 342 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 SELENOSQ9BQE4 189 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 LHPPQ9H008 270 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 ZNF304Q9HCX3 659 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 INTS10Q9NVR2 710 aaKnown RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 MARCH4Q9P2E8 410 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 ZNF282Q9UDV7 671 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 PLEKHB1Q9UF11 243 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 TTC7AQ9ULT0 858 aaPredicted RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 PLAGL1Q9UM63 463 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 FAM169AQ9Y6X4 670 aa7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 SPTAN1Q13813 2472 aaKnown RBP7.45□□□□□ -1.22
PTCSC3-201ENST00000556013 FER1L5A0AVI2 2057 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 FAM237BA0A1B0GVD1 139 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 A0A1W2PPV9 198 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 ANKUB1A6NFN9 424 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 CDK2AP1O14519 115 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 SOCS6O14544 535 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 CTSVO60911 334 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 VPS26AO75436 327 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 PSIP1O75475 530 aaKnown RBP7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 VAPBO95292 243 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 FGGP02679 453 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 CTSBP07858 339 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 CCDC175P0C221 793 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 ZSCAN5DPP0CG00 497 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 ICAM2P13598 275 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 ENO3P13929 434 aaPredicted RBP7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 CHRM3P20309 590 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 HRH2P25021 359 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 ITGA3P26006 1051 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 ARNTP27540 789 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 NMBRP28336 390 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 UQCRFS1P47985 274 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 CSE1LP55060 971 aaKnown RBP7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 BASP1P80723 227 aaKnown RBP7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 PRDX1Q06830 199 aaKnown RBP7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 FAM53BQ14153 422 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 ELOAQ14241 798 aaKnown RBP7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 TLR1Q15399 786 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 PRTGQ2VWP7 1150 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 TTLL9Q3SXZ7 439 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 TUBB8Q3ZCM7 444 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 CTSL3PQ5NE16 218 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 COX15Q7KZN9 410 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 GSTA5Q7RTV2 222 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 LDB1Q86U70 411 aaPredicted RBP7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 CISD2Q8N5K1 135 aaKnown RBP7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 ST6GALNAC3Q8NDV1 305 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 MCUQ8NE86 351 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 PRR7Q8TB68 274 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 STT3BQ8TCJ2 826 aa7.44□□□□□ -1.22
PTCSC3-201ENST00000556013 LKAAEAR1Q8TD35 194 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms