RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TTKP33981 857 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CHIT1Q13231 466 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 RUNX2Q13950 521 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PDGFRLQ15198 375 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 GDF6Q6KF10 455 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 GALNT10Q86SR1 603 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 AMZ2Q86W34 360 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SPATA6Q9NWH7 488 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CFAP20Q9Y6A4 193 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ZFP37Q9Y6Q3 630 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 NPIPA2E9PIF3 369 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 NPIPA3F8WFD2 350 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CDC7O00311 574 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ERBB2P04626 1255 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 TYRP1P17643 537 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 OAZ1P54368 228 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 LRRC66Q68CR7 880 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SYCE2Q6PIF2 218 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 GPC2Q8N158 579 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHB18PQ96TA0 734 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 POLR2J3Q9H1A7 115 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF225Q9UK10 706 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PLAGL2Q9UPG8 496 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 A0A1W2PRQ8 180 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 DISC1C4P0D8 188 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 M0R2N6 131 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 LDB2O43679 373 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 AIREO43918 545 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 LATS1O95835 1130 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PAX3P23760 479 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CRISP1P54107 249 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ATAD3CQ5T2N8 411 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 C9orf57Q5W0N0 161 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SNX29P2Q8IUI4 249 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 FAM46DQ8NEK8 389 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 NPLOC4Q8TAT6 608 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 LIN37Q96GY3 246 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 FAM83DQ9H4H8 585 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 NUDT15Q9NV35 164 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 NEXMIFQ5QGS0 1516 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 A0A1B0GVM2 712 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ELOVL7A1L3X0 281 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 TCAF2A6NFQ2 919 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 TM7SF2O76062 418 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 BRCC3P46736 316 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 VMACQ2NL98 169 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PIWIL4Q7Z3Z4 852 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 IFNL1Q8IU54 200 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 GOLGA2P5Q9HBQ8 144 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 KCNN3Q9UGI6 736 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 TMPRSS11EQ9UL52 423 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHB3Q9Y5E6 796 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 HSBP1L1C9JCN9 74 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ITGA10O75578 1167 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 MLLT10P55197 1068 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 BATFQ16520 125 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SH3PXD2AQ5TCZ1 1133 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 MOB2Q70IA6 237 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 UPF1Q92900 1129 aaKnown RBP eCLIP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 MSLNLQ96KJ4 702 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ALPK1Q96QP1 1244 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ACO2Q99798 780 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 FUZQ9BT04 418 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 TDP1Q9NUW8 608 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 HDAC3O15379 428 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CTDNEP1O95476 244 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 DGKGP49619 791 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 RIDAP52758 137 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 FAM92BQ6ZTR7 304 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SPATA22Q8NHS9 363 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 HM13Q8TCT9 377 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 THEM6Q8WUY1 208 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PCDHGA8Q9Y5G5 932 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 FABP12A6NFH5 140 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 BLOC1S5-TXNDC5H3BN57 136 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 POP4O95707 220 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 CYP11A1P05108 521 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 HOXB9P17482 250 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 MSR1P21757 451 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SHMT1P34896 483 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SGCAQ16586 387 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 OR52E4Q8NGH9 312 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 THAP3Q8WTV1 239 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 BTN2A3PQ96KV6 586 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 SCGB3A2Q96PL1 93 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PAPOLGQ9BWT3 736 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 C1orf21Q9H246 121 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 WDR26Q9H7D7 661 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 KAT8Q9H7Z6 458 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 PADI2Q9Y2J8 665 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 HEMK1Q9Y5R4 338 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 B3GALT1Q9Y5Z6 326 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ARHGEF5Q12774 1597 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 A0A0U1RQK1 487 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 IRF6O14896 467 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 ADAMDEC1O15204 470 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 IFNGR1P15260 489 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 RPS2P15880 293 aaKnown RBP6.74□□□□□ -1.33
SYNE2-216ENST00000555002 FNTBP49356 437 aa6.74□□□□□ -1.33
SYNE2-216ENST00000555002 RHBDL3P58872 404 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms