RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FASTKD1Q53R41 847 aaKnown RBP12.07□□□□□ -0.48
SHMT2-214ENST00000554604 DUS1LQ6P1R4 473 aaKnown RBP12.07□□□□□ -0.48
SHMT2-214ENST00000554604 CYB5D1Q6P9G0 228 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 PRSS42Q7Z5A4 293 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 LMNTD2Q8IXW0 634 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 PIANPQ8IYJ0 282 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 NLGN4XQ8N0W4 816 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 LILRA3Q8N6C8 439 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-214ENST00000554604 CLDN19Q8N6F1 224 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 C2CD4AQ8NCU7 369 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-214ENST00000554604 NLGN4YQ8NFZ3 816 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-214ENST00000554604 ZFPM2Q8WW38 1151 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 TTC9Q92623 222 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 KIAA1143Q96AT1 154 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-214ENST00000554604 OR6C1Q96RD1 312 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 TTC1Q99614 292 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 MECRQ9BV79 373 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 RAB33BQ9H082 229 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 ZNF768Q9H5H4 540 aaKnown RBP12.07□□□□□ -0.48
SHMT2-214ENST00000554604 KIR3DX1Q9H7L2 352 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 NPHS2Q9NP85 383 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 HRASLS2Q9NWW9 162 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 TMEM216Q9P0N5 145 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 MID2Q9UJV3 735 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 PILRAQ9UKJ1 303 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 RIMKLBQ9ULI2 386 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 ZNF462Q96JM2 2506 aa12.07□□□□□ -0.48
SHMT2-214ENST00000554604 UBA6A0AVT1 1052 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-214ENST00000554604 CCDC162PA2VCL2 907 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 CFAP73A6NFT4 308 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 OR51F1A6NGY5 319 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 QSOX1O00391 747 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 ATP5HO75947 161 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 AHSGP02765 367 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 C2P06681 752 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 GSTM1P09488 218 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 GRK2P25098 689 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 MAP4P27816 1152 aaKnown RBP12.06□□□□□ -0.48
SHMT2-214ENST00000554604 NSG1P42857 185 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 SH3BP2P78314 561 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 PRAMEP78395 509 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 GSTM4Q03013 218 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 ACVR1Q04771 509 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 STX3Q13277 289 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 LY6DQ14210 128 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 IL11RAQ14626 422 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 PCLAFQ15004 111 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 CAPRIN2Q6IMN6 1127 aaKnown RBP12.06□□□□□ -0.48
SHMT2-214ENST00000554604 C16orf46Q6P387 395 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 PCSK4Q6UW60 755 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 CCDC91Q7Z6B0 441 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 CMC1Q7Z7K0 106 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 OOSP2Q86WS3 158 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 RASGRP3Q8IV61 690 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 OR6P1Q8NGX9 317 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 RFWD2Q8NHY2 731 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 RDH11Q8TC12 318 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 KLHL6Q8WZ60 621 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 HDAC10Q969S8 669 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 LRRC37BQ96QE4 947 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 ARHGAP9Q9BRR9 750 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 SIKE1Q9BRV8 207 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 ULBP3Q9BZM4 244 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 TRIT1Q9H3H1 467 aaKnown RBP12.06□□□□□ -0.48
SHMT2-214ENST00000554604 COG4Q9H9E3 785 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 GPN2Q9H9Y4 310 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-214ENST00000554604 THAP1Q9NVV9 213 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 SIDT1Q9NXL6 827 aaKnown RBP12.06□□□□□ -0.48
SHMT2-214ENST00000554604 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-214ENST00000554604 SLC2A6Q9UGQ3 507 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 FBXO5Q9UKT4 447 aa12.06□□□□□ -0.48
SHMT2-214ENST00000554604 SNRNP200O75643 2136 aaKnown RBP12.05□□□□□ -0.48
SHMT2-214ENST00000554604 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 OR6C74A6NCV1 312 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 OR5K3A6NET4 321 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 TLCD2A6NGC4 264 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 F8W8V4 182 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 H0YHG0 523 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 AP2A2O94973 939 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 SERPINE1P05121 402 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 LIFP15018 202 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 NELFEP18615 380 aaKnown RBP12.05□□□□□ -0.48
SHMT2-214ENST00000554604 GABRB3P28472 473 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 CD151P48509 253 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 ARFIP2P53365 341 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 PRKAA2P54646 552 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 NCALDP61601 193 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 PPP1CAP62136 330 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 PRKAA1Q13131 559 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 RPA4Q13156 261 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 LYPLAL1Q5VWZ2 237 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 NEPROQ6NW34 567 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 CRLF3Q8IUI8 442 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 SIDT2Q8NBJ9 832 aaKnown RBP12.05□□□□□ -0.48
SHMT2-214ENST00000554604 LCN9Q8WX39 176 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 EXTL1Q92935 676 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 THOC1Q96FV9 657 aaKnown RBP12.05□□□□□ -0.48
SHMT2-214ENST00000554604 ELMO2Q96JJ3 720 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 TSNARE1Q96NA8 513 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms