RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SOWAHCQ53LP3 525 aaPredicted RBP16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 SPANXN4Q5MJ08 99 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 BOCQ9BWV1 1114 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 NXF2Q9GZY0 626 aaKnown RBP16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 SH3BGRLO75368 114 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 LRATO95237 230 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 TSPAN12O95859 305 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 EPHA2P29317 976 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 PPP3CCP48454 512 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 CYP4F3Q08477 520 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 CTSL3PQ5NE16 218 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 LYPD8Q6UX82 237 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 SLC38A6Q8IZM9 456 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 CADM2Q8N3J6 435 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 PAF1Q8N7H5 531 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 GIMAP4Q9NUV9 329 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 TRPV2Q9Y5S1 764 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 A3GALT2U3KPV4 340 aa16.51■□□□□ 0.23
PPP4R3A-202ENST00000554390 LOC100506127A0A0U1RQW1 187 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 M0R082 166 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 ERVH48-1M5A8F1 160 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 IRF1P10914 325 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 IFNA8P32881 189 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 CTSKP43235 329 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 FAM189BP81408 668 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 KEAP1Q14145 624 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 MAD2L1BPQ15013 274 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 LDLRAD1Q5T700 205 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 EFL1Q7Z2Z2 1120 aaKnown RBP16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 NRARPQ7Z6K4 114 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 SLC39A13Q96H72 371 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 SH3GL1Q99961 368 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 APOL4Q9BPW4 351 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 TMEM248Q9NWD8 314 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 TRMT6Q9UJA5 497 aaKnown RBP16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 TLR6Q9Y2C9 796 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 HSPE1-MOB4S4R3N1 261 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 DOCK4Q8N1I0 1966 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 MSH3P20585 1137 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 SLC6A4P31645 630 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 GRK5P34947 590 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 DDOSTP39656 456 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 CPT1AP50416 773 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 DAPP51397 102 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 TWF1Q12792 350 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 LRRC26Q2I0M4 334 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 Q5BKY6 102 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 CPZQ66K79 652 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 RNF175Q8N4F7 328 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 NEDD4LQ96PU5 975 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 DCAF13Q9NV06 445 aaKnown RBP16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 TAS2R9Q9NYW1 312 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 AFF4Q9UHB7 1163 aaKnown RBP16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 RECQL5O94762 991 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 SCELO95171 688 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 SERPINA1P01009 418 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 ALPIP09923 528 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 GKP32189 559 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 PRR23CQ6ZRP0 262 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 CEP68Q76N32 757 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 ELMOD2Q8IZ81 293 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 JPH3Q8WXH2 748 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 SDHCQ99643 169 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 ERVK13-1Q9NX77 482 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 MKLN1Q9UL63 735 aa16.5■□□□□ 0.23
PPP4R3A-202ENST00000554390 MYO16Q9Y6X6 1858 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 CREG1O75629 220 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 GTF2H3Q13889 308 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 TBRG1Q3YBR2 411 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 CARD16Q5EG05 197 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 SPANXN2Q5MJ10 180 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 SHQ1Q6PI26 577 aaKnown RBP16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 BPHLQ86WA6 291 aaPredicted RBP16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 TTC29Q8NA56 475 aaPredicted RBP16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 ANKK1Q8NFD2 765 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 OR56A4Q8NGH8 313 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 CD200R1Q8TD46 325 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 TRIM63Q969Q1 353 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 SLA2Q9H6Q3 261 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 GKN1Q9NS71 199 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 MOSPD1Q9UJG1 213 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 BTBD3Q9Y2F9 522 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 LCHNA4D1U4 455 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 SNX4O95219 450 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 SLC15A1P46059 708 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 ZNF438Q7Z4V0 828 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 MON1AQ86VX9 555 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 NETO1Q8TDF5 533 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 PPP1R2P1Q96PQ5 205 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 DERL2Q9GZP9 239 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 RPRD1BQ9NQG5 326 aaKnown RBP16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 PCDH10Q9P2E7 1040 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 RAPGEFL1Q9UHV5 662 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 PEX16Q9Y5Y5 336 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 GREB1Q4ZG55 1949 aa16.49■□□□□ 0.23
PPP4R3A-202ENST00000554390 A0A096LPI6 279 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 MYO1GB0I1T2 1018 aa16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 C21orf33P30042 268 aaPredicted RBP16.48■□□□□ 0.23
PPP4R3A-202ENST00000554390 TUSC3Q13454 348 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms