RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 CAMK2BQ13554 666 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 NAE1Q13564 534 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 TRA2AQ13595 282 aaKnown RBP eCLIP14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 PTCHD3Q3KNS1 767 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 KIAA1614Q5VZ46 1190 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 FAM92BQ6ZTR7 304 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 HDXQ7Z353 690 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 CROCCP2Q86T23 111 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 SRRM1Q8IYB3 904 aaKnown RBP14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 SYTL1Q8IYJ3 562 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 BMPERQ8N8U9 685 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 RCBTB1Q8NDN9 531 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 OR2L3Q8NG85 312 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 ATL1Q8WXF7 558 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 PYCR2Q96C36 320 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 TLCD1Q96CP7 247 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 ZDHHC12Q96GR4 267 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 LIN37Q96GY3 246 aaPredicted RBP14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 APOPT1Q96IL0 206 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 HIST1H2AHQ96KK5 128 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 TRAPPC9Q96Q05 1148 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 HIST1H2AJQ99878 128 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 H2AFJQ9BTM1 129 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 TRIM54Q9BYV2 358 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 CHRNA10Q9GZZ6 450 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 MRPL46Q9H2W6 279 aaKnown RBP14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 ZNF768Q9H5H4 540 aaKnown RBP14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 SYNDIG1Q9H7V2 258 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 SLC6A20Q9NP91 592 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 C1GALT1Q9NS00 363 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 SIDT1Q9NXL6 827 aaKnown RBP14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 DCDC2Q9UHG0 476 aa14.31□□□□□ -0.12
MTHFD1-204ENST00000553405 FRYQ5TBA9 3013 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 FAM149AA5PLN7 773 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 NCF1BA6NI72 391 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 ZNF839A8K0R7 811 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 NCF1CA8MVU1 366 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 G3V2L1 256 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 RGS16O15492 202 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 HYAL3O43820 417 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 NRP2O60462 931 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 PLIN3O60664 434 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 PRAMEF10O60809 474 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 GLRA3O75311 464 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 FKBP9O95302 570 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 ANXA5P08758 320 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 NCF1P14598 390 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 EPORP19235 508 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 GDF5P43026 501 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 GABRA4P48169 554 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 INHBCP55103 352 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 PRDX1Q06830 199 aaKnown RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 PRKAA1Q13131 559 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 TARDBPQ13148 414 aaKnown RBP eCLIP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 SETDB1Q15047 1291 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 FBXO48Q5FWF7 155 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 FCRL6Q6DN72 434 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 SULT1C3Q6IMI6 304 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 ZNF425Q6IV72 752 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 KLC3Q6P597 504 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 FRA10AC1Q70Z53 315 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 RAB42Q8N4Z0 105 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 ESAMQ96AP7 390 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 ARL8AQ96BM9 186 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 PRR11Q96HE9 360 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 TMEM74Q96NL1 305 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 DEPDC7Q96QD5 511 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 SYNPO2LQ9H987 977 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 CCDC177Q9NQR7 707 aaPredicted RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 SENP1Q9P0U3 644 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 CPSF2Q9P2I0 782 aaKnown RBP14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 KLHL3Q9UH77 587 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 TAC3Q9UHF0 121 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 BTRCQ9Y297 605 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 ACTL7BQ9Y614 415 aa14.3□□□□□ -0.12
MTHFD1-204ENST00000553405 A0A0J9YY10 115 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 LRRC14BA6NHZ5 514 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 SLC9B1P1A6NJY1 282 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 SYCE1LA8MT33 242 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 A8MT66 165 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 ISM1B1AKI9 464 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 SUPT3HB4E1H0 165 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 HGSO14964 777 aaPredicted RBP14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 HCRTR1O43613 425 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 PRAMEF4O60810 478 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 SUPT3HO75486 399 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 NELFEP18615 380 aaKnown RBP14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 GRIA3P42263 894 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 NFKB2Q00653 900 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 MPP2Q14168 576 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 E2F2Q14209 437 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 CACHD1Q5VU97 1274 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 PRAMEF9Q5VWM5 478 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 ICE2Q659A1 982 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 LCTLQ6UWM7 567 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 DGLUCYQ7Z3D6 616 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 TCAIMQ8N3R3 496 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 D2HGDHQ8N465 521 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 EXT2Q93063 718 aa14.29□□□□□ -0.12
MTHFD1-204ENST00000553405 SLC22A18Q96BI1 424 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms