RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 NUP210LQ5VU65 1888 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 NPEPPSL1A6NEC2 478 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 PHGDHO43175 533 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 STK17BO94768 372 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 CCNDBP1O95273 360 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 MYBL2P10244 700 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 PMS2P54278 862 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 TBPL1P62380 186 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 CLN3Q13286 438 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 FASTKQ14296 549 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 ZIC1Q15915 447 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 MBOAT1Q6ZNC8 495 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 LRRC69Q6ZNQ3 347 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 CDHR3Q6ZTQ4 885 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 TAOK1Q7L7X3 1001 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 ZFAND4Q86XD8 727 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 DTX1Q86Y01 620 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 SPACA3Q8IXA5 215 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 GSPT2Q8IYD1 628 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 C2orf73Q8N5S3 287 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 OR2A1Q8NGT9 310 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 ANKRD49Q8WVL7 239 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 ZNF501Q96CX3 271 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 PAFAH2Q99487 392 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 TRIM54Q9BYV2 358 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 KLHL25Q9H0H3 589 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 ANKZF1Q9H8Y5 726 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 CCDC177Q9NQR7 707 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 ANKMY1Q9P2S6 941 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 PILRAQ9UKJ1 303 aa11.28□□□□□ -0.6
TRAFD1-209ENST00000552896 CCDC88CQ9P219 2028 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 TARM1B6A8C7 271 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 TMEM150CB9EJG8 249 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 E7ENX8 843 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 RIPK2O43353 540 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 CPNE3O75131 537 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 INHBAP08476 426 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 HIST1H2AGP0C0S8 130 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 FAM153BP0C7A2 387 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 SLC35E2BP0CK96 405 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 HIST1H2ADP20671 130 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 CCND1P24385 295 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 CNTFP26441 200 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 CRABP2P29373 138 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 CMPK1P30085 196 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 SLC26A3P40879 764 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 GRIA3P42263 894 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 GABRA4P48169 554 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 SERPINB8P50452 374 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 SERPINB9P50453 376 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 CSRP3P50461 194 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 ATP1A2P50993 1020 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 UCNP55089 124 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 CDKL1Q00532 357 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 TAP2Q03519 686 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 TLE3Q04726 772 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 SF1Q15637 639 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 UAP1Q16222 522 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 FAM153CQ494X1 144 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 KIAA1614Q5VZ46 1190 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 SUSD1Q6UWL2 747 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 LRRC56Q8IYG6 542 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 ATL1Q8WXF7 558 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 FBXL8Q96CD0 374 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 NAF1Q96HR8 494 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 HIST1H2AHQ96KK5 128 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 UBXN10Q96LJ8 280 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 MIPEPQ99797 713 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 HIST1H2AJQ99878 128 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 H2AFJQ9BTM1 129 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 SPRY4Q9C004 299 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 SLC6A20Q9NP91 592 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 ARL15Q9NXU5 204 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 CTNNAL1Q9UBT7 734 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 TAC3Q9UHF0 121 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 ZNF180Q9UJW8 692 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 IKZF3Q9UKT9 509 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 OARD1Q9Y530 152 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 IKBKGQ9Y6K9 419 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 LOC400499M0QZD8 3231 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 MGAQ8IWI9 3026 aa11.27□□□□□ -0.61
TRAFD1-209ENST00000552896 EXOC1LA0A1B0GW35 172 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 HMX2A2RU54 273 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 OR2A25A4D2G3 310 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 CDC7O00311 574 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 KLK10O43240 276 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 RAD1O60671 282 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 KIAA0754O94854 1291 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 TIAF1O95411 115 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 CCDC166P0CW27 439 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 ZNF28P17035 718 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 ITGA1P56199 1179 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 ATP6V0D1P61421 351 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 ABATP80404 500 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 TSTA3Q13630 321 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 BMPR2Q13873 1038 aa11.26□□□□□ -0.61
TRAFD1-209ENST00000552896 TSNQ15631 228 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms