RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 GINS2Q9Y248 185 aa5.17□□□□□ -1.58
LSM3P2-201ENST00000551246 TPRKBQ9Y3C4 175 aa5.17□□□□□ -1.58
LSM3P2-201ENST00000551246 HES2Q9Y543 173 aa5.17□□□□□ -1.58
LSM3P2-201ENST00000551246 IPPQ9Y573 584 aa5.17□□□□□ -1.58
LSM3P2-201ENST00000551246 KLK4Q9Y5K2 254 aa5.17□□□□□ -1.58
LSM3P2-201ENST00000551246 SNX8Q9Y5X2 465 aa5.17□□□□□ -1.58
LSM3P2-201ENST00000551246 ACTL7AQ9Y615 435 aa5.17□□□□□ -1.58
LSM3P2-201ENST00000551246 U3KQ87 197 aa5.17□□□□□ -1.58
LSM3P2-201ENST00000551246 COL1A2P08123 1366 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 A0A0A6YYJ9 748 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 CIB4A0PJX0 185 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ASPDHA6ND91 283 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PRR23AA6NEV1 266 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 OR6C70A6NIJ9 312 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 A8MUA0 341 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 A8MXK9 166 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 LINC00587B1AMM8 73 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 F8W810 466 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 I3L521 148 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 DNASE2O00115 360 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ANKRD28O15084 1053 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PROM1O43490 865 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RGS10O43665 173 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 HS6ST1O60243 411 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 GMDSO60547 372 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PRKCBP05771 671 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ALDOCP09972 364 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RAP2AP10114 183 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 HOXB6P17509 224 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 CAPN3P20807 821 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 MAGP20916 626 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TNFSF8P32971 234 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SPRP35270 261 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TGFBR1P36897 503 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 CTSKP43235 329 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 KIR2DL3P43628 341 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 BRCC3P46736 316 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PPP3CCP48454 512 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PXNP49023 591 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 CENPAP49450 140 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 MAP2K6P52564 334 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ARHGDIBP52566 201 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 BCAT1P54687 386 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RAB25P57735 213 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 IRF9Q00978 393 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 EMX2Q04743 252 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ZNF267Q14586 743 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ANGPT1Q15389 498 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TAB1Q15750 504 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 GPR19Q15760 415 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TBCEQ15813 527 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 BAK1Q16611 211 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 KYAT1Q16773 422 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 HADHQ16836 314 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 CYP51A1Q16850 503 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 COL28A1Q2UY09 1125 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 FAM214AQ32MH5 1076 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ZIK1Q3SY52 487 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 Q3ZCU0 254 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 GPR33Q49SQ1 333 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 IQCCQ4KMZ1 466 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ANKRD39Q53RE8 183 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PRR16Q569H4 304 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PABPC1L2AQ5JQF8 200 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 GPATCH4Q5T3I0 446 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SUSD4Q5VX71 490 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 USP17L6PQ6QN14 398 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 NPNTQ6UXI9 565 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 KCTD1Q719H9 257 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PIWIL4Q7Z3Z4 852 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 CMC1Q7Z7K0 106 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TMEM135Q86UB9 458 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 COMMD7Q86VX2 200 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TSPYL5Q86VY4 417 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ZSWIM9Q86XI8 627 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RFX6Q8HWS3 928 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 KLHDC8BQ8IXV7 354 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SYTL1Q8IYJ3 562 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 DCP1BQ8IZD4 617 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 LIX1Q8N485 282 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 NLGN4YQ8NFZ3 816 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 OR5T2Q8NGG2 359 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 JOSD2Q8TAC2 188 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RAET1EQ8TD07 263 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 KCTD4Q8WVF5 259 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ZNF606Q8WXB4 792 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 AKAP1Q92667 903 aaKnown RBP eCLIP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RBPMSQ93062 196 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 HGDQ93099 445 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PTERQ96BW5 349 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 LRRC58Q96CX6 371 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ANAPC16Q96DE5 110 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SGTBQ96EQ0 304 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SLC47A1Q96FL8 570 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 B3GALT6Q96L58 329 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 FCRL3Q96P31 734 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 MCEEQ96PE7 176 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RBM14Q96PK6 669 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PEBP4Q96S96 227 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 GPR22Q99680 433 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms