RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 P2RY12Q9H244 342 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 SOX17Q9H6I2 414 aaPredicted RBP20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 CHRAC1Q9NRG0 131 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 SEMA3GQ9NS98 782 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 ZNF148Q9UQR1 794 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 CAPN6Q9Y6Q1 641 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 CRYBG3Q68DQ2 2970 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 C1orf105O95561 183 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 TSFMP43897 325 aaKnown RBP20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 TUBB8Q3ZCM7 444 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 PTRHD1Q6GMV3 140 aaKnown RBP20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 TTC23LQ6PF05 361 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 PARP9Q8IXQ6 854 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 TXLNBQ8N3L3 684 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 DTWD1Q8N5C7 304 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 PPHLN1Q8NEY8 458 aaKnown RBP20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 OR11G2Q8NGC1 345 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 HMGCLL1Q8TB92 370 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 DNAJB14Q8TBM8 379 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 PANX3Q96QZ0 392 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 NFS1Q9Y697 457 aa20.75■□□□□ 0.91
SMARCC2-210ENST00000550519 CD3EAPO15446 510 aaKnown RBP20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 APRTP07741 180 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 VSX2P58304 361 aaPredicted RBP20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 RBBP7Q16576 425 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 CCSMST1Q4G0I0 132 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 PCID2Q5JVF3 399 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 WASHC2DQ5SRD0 308 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 IRAK1BP1Q5VVH5 260 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 METTL27Q8N6F8 245 aaPredicted RBP20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 C1orf54Q8WWF1 131 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 DOCK10Q96BY6 2186 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 VPS50Q96JG6 964 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 DESI2Q9BSY9 194 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 TREX1Q9NSU2 369 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 PAK5Q9P286 719 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 TTC7AQ9ULT0 858 aaPredicted RBP20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 MRFAP1Q9Y605 127 aa20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 MDC1Q14676 2089 aaKnown RBP20.74■□□□□ 0.91
SMARCC2-210ENST00000550519 NUP210LQ5VU65 1888 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 HYKKA2RU49 373 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 E2F3O00716 465 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 KPNA5O15131 536 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 MED26O95402 600 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 RPS3P23396 243 aaKnown RBP eCLIP20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 PSMB5P28074 263 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 Q0VFX4 171 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 ZNF169Q14929 603 aaPredicted RBP20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 SEL1L2Q5TEA6 688 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 B3GNTL1Q67FW5 361 aaPredicted RBP20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 FRMPD2BQ6IN97 320 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 LRRC6Q86X45 466 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 SLC13A5Q86YT5 568 aaPredicted RBP20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 OR2L3Q8NG85 312 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 OR2A1Q8NGT9 310 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 GSDMBQ8TAX9 411 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 GRHL3Q8TE85 626 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 MIPEPQ99797 713 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 EPS8L2Q9H6S3 715 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 GNPTGQ9UJJ9 305 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 MAU2Q9Y6X3 613 aa20.73■□□□□ 0.91
SMARCC2-210ENST00000550519 KRT87PA6NCN2 255 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 BDKRB1P46663 353 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 KLC1Q07866 573 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 RNF44Q7L0R7 432 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 OTOAQ7RTW8 1153 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 MPP5Q8N3R9 675 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 RAB42Q8N4Z0 105 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 RNF10Q8N5U6 811 aaKnown RBP20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 STT3BQ8TCJ2 826 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 FAR1Q8WVX9 515 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 THOC3Q96J01 351 aaKnown RBP20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 MESP1Q9BRJ9 268 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 CRB3Q9BUF7 120 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 RBSNQ9H1K0 784 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 ZNF304Q9HCX3 659 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 RUVBL2Q9Y230 463 aaKnown RBP20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 FAM169AQ9Y6X4 670 aa20.72■□□□□ 0.91
SMARCC2-210ENST00000550519 LOC105369274A0A096LPK9 316 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 LOC102723532A0A0G2JNH3 316 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 A0A0J9YVX5 310 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 A0A1W2PPV9 198 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 NRP2O60462 931 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 HPP00738 406 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 ZSCAN5DPP0CG00 497 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 RPL22P35268 128 aaKnown RBP20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 CCNFP41002 786 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 CARSP49589 748 aaKnown RBP20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 SESN2P58004 480 aaPredicted RBP20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 CRADDP78560 199 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 CDC16Q13042 620 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 SNX1Q13596 522 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 TLR1Q15399 786 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 PRMT9Q6P2P2 845 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 ISLR2Q6UXK2 745 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 OR4N4Q8N0Y3 316 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 CCDC89Q8N998 374 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 SKA2Q8WVK7 121 aaPredicted RBP20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 CNDP1Q96KN2 507 aa20.71■□□□□ 0.91
SMARCC2-210ENST00000550519 LMF1Q96S06 567 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms