RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 LPIN3Q9BQK8 851 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 SACM1LQ9NTJ5 587 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 COL1A2P08123 1366 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 CPSF4LA6NMK7 179 aaKnown RBP15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 WWP2O00308 870 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 ONECUT3O60422 494 aaPredicted RBP15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 TPST2O60704 377 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 CD247P20963 164 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 GPR1P46091 355 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 MRPS6P82932 125 aaKnown RBP15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 EMX2Q04743 252 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 OR7D4Q8NG98 312 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 CCDC115Q96NT0 180 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 HAPLN3Q96S86 360 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 ASPNQ9BXN1 380 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 BEX2Q9BXY8 128 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 SEZ6LQ9BYH1 1024 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 POLR3BQ9NW08 1133 aaPredicted RBP15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 PCDHGA11Q9Y5H2 935 aa15.45■□□□□ 0.06
RBFOX1-212ENST00000550418 RIIAD1A6NNX1 92 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 PLD2O14939 933 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 TACR2P21452 398 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 ITGA3P26006 1051 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 OPRL1P41146 370 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SMCO1Q147U7 214 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 CRB2Q5IJ48 1285 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 OR4F3Q6IEY1 312 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 CYP4V2Q6ZWL3 525 aaPredicted RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 LINGO2Q7L985 606 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 MOCOSQ96EN8 888 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 CDKN2AIPNLQ96HQ2 116 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SLC29A1Q99808 456 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 IL1RAPQ9NPH3 570 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 FZD4Q9ULV1 537 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 ZNF780BQ9Y6R6 833 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 AKAP8O43823 692 aaKnown RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 DFNA5O60443 496 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 OPN1SWP03999 348 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 TFAP2AP05549 437 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 NFKB2Q00653 900 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 RAET1GQ6H3X3 334 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 OR10H4Q8NGA5 316 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 ZSCAN5AQ9BUG6 496 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 BCO2Q9BYV7 579 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 MAGEH1Q9H213 219 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 BAZ2AQ9UIF9 1905 aaKnown RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SNED1Q8TER0 1413 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 CDC7O00311 574 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 CPN2P22792 545 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 GABARAPL2P60520 117 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 TXNL4AP83876 142 aaKnown RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 TSC22D1Q15714 1073 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 RPTNQ6XPR3 784 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 TMEM192Q8IY95 271 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SLC7A5P1Q8MH63 180 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 ZNF557Q8N988 423 aaPredicted RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 ZNF675Q8TD23 568 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 HSH2DQ96JZ2 352 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SNX27Q96L92 541 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 EQTNQ9NQ60 294 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SEC14L4Q9UDX3 406 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 DUOX1Q9NRD9 1551 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 C12orf71A8MTZ7 269 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 HCN1O60741 890 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 C1RP00736 705 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 LAMP2P13473 410 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SLC5A2P31639 672 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SCARB2Q14108 478 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 IGFN1Q86VF2 1251 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 RAVER1Q8IY67 606 aaKnown RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 CMTR2Q8IYT2 770 aaKnown RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 RNASE11Q8TAA1 199 aaKnown RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 SLC35F5Q8WV83 523 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 EXOSC8Q96B26 276 aaKnown RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 MSANTD3Q96H12 275 aa15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 MTERF1Q99551 399 aaKnown RBP15.44■□□□□ 0.06
RBFOX1-212ENST00000550418 ZNF132P52740 706 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 CLCA4Q14CN2 919 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 TNKS2Q9H2K2 1166 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 FAM118AQ9NWS6 357 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 IKZF2Q9UKS7 526 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 ABHD14A-ACY1A0A1B0GW23 586 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 L7N2F9 121 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 PTTG1O95997 202 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 HLA-DPB1P04440 258 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 CDKL1Q00532 357 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 SGCGQ13326 291 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 TUSC3Q13454 348 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 GARNL3Q5VVW2 1013 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 ADGRD2Q7Z7M1 963 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 SLC43A3Q8NBI5 491 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 GEMIN6Q8WXD5 167 aaKnown RBP15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 SMG7Q92540 1137 aaKnown RBP15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 LHPPQ9H008 270 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 ZNF142P52746 1687 aaPredicted RBP15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 ZNF487B1APH4 448 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 H3BM21 787 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 IGFBP4P22692 258 aa15.43■□□□□ 0.06
RBFOX1-212ENST00000550418 SLC10A7Q0GE19 358 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms