RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CCDC162PA2VCL2 907 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 PJA2O43164 708 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 USP1O94782 785 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 SLCO2B1O94956 709 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 TJP3O95049 919 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 METTL18O95568 372 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 RPN2P04844 631 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 ZGLP1P0C6A0 271 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 MCM3P25205 808 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 CTNNA2P26232 953 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 CCR7P32248 378 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 FOXN2P32314 431 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 CTNNA1P35221 906 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 SOX11P35716 441 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 OR1D4P47884 311 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 KLC1Q07866 573 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 POU6F1Q14863 301 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF630Q2M218 657 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 ZXDCQ2QGD7 858 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 SYTL3Q4VX76 610 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 WASHC2DQ5SRD0 308 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 MTFR2Q6P444 385 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 UNC5DQ6UXZ4 953 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 NAPRTQ6XQN6 538 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 NDUFAF7Q7L592 441 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 TTC29Q8NA56 475 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 DNAJB8Q8NHS0 232 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 STT3BQ8TCJ2 826 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 CALR3Q96L12 384 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 SELENOSQ9BQE4 189 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 CRB3Q9BUF7 120 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 LRRC40Q9H9A6 602 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF160Q9HCG1 818 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF282Q9UDV7 671 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 RIMKLBQ9ULI2 386 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 OR51F1A6NGY5 319 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 RASGRF2O14827 1237 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 OR1I1O60431 355 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 CTSVO60911 334 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 BMP10O95393 424 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 SERPINA7P05543 415 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 PRR35P0CG20 571 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 ACPPP15309 386 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 CETN2P41208 172 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 KCNK10P57789 538 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 ARG2P78540 354 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 OCA2Q04671 838 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 HSPA14Q0VDF9 509 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 TBX2Q13207 712 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 XKRXQ6PP77 449 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 TMEM207Q6UWW9 146 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 GFRALQ6UXV0 394 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 RPTNQ6XPR3 784 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 BNC2Q6ZN30 1099 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 NLRP9Q7RTR0 991 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 MRGPRGQ86SM5 289 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 LINC00523Q86TU6 105 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 VRK3Q8IV63 474 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 CNGA4Q8IV77 575 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 DCUN1D3Q8IWE4 304 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF808Q8N4W9 903 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 C2orf73Q8N5S3 287 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 HMGCLL1Q8TB92 370 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 MIEF2Q96C03 454 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 TSSK1BQ9BXA7 367 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 RNF32Q9H0A6 362 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 ABI3Q9P2A4 366 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 IMPACTQ9P2X3 320 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 SUCOQ9UBS9 1254 aaKnown RBP9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 C3orf18Q9UK00 162 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 PCDHA13Q9Y5I0 950 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 POLQO75417 2590 aa9.4□□□□□ -0.9
TRAFD1-207ENST00000550051 CPAMD8Q8IZJ3 1885 aa9.4□□□□□ -0.91
TRAFD1-207ENST00000550051 CSMD2Q7Z408 3487 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 NSG1A0A0A6YYJ2 146 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 AKR1B15C9JRZ8 316 aaPredicted RBP9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 CCL21O00585 134 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 MAP2K7O14733 419 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 MED26O95402 600 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 CRYABP02511 175 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 APOA4P06727 396 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 MYBL2P10244 700 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 ICAM2P13598 275 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 AGAP20933 346 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 AOAHP28039 575 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 HTR1EP28566 365 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 PPARGP37231 505 aaPredicted RBP9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 CA7P43166 264 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 EMP2P54851 167 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 RWDD2BP57060 319 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 VSX2P58304 361 aaPredicted RBP9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 ACVR1Q04771 509 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 P3H1Q32P28 736 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 FRMPD2BQ6IN97 320 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 FBXO42Q6P3S6 717 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 TTC23LQ6PF05 361 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 RIPOR1Q6ZS17 1223 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 ARHGEF18Q6ZSZ5 1173 aa9.39□□□□□ -0.91
TRAFD1-207ENST00000550051 GDF7Q7Z4P5 450 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms