RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 SRSF11Q05519 484 aaKnown RBP14.62□□□□□ -0.07
CUX1-214ENST00000550008 PDGFRLQ15198 375 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 HEATR4Q86WZ0 1026 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 ZFP28Q8NHY6 868 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 LCN9Q8WX39 176 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 HERVK_113Q902F9 699 aa14.62□□□□□ -0.07
CUX1-214ENST00000550008 SNTNA6NMZ2 147 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 OCM2P0CE71 109 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 OCMP0CE72 109 aaPredicted RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 MYL12AP19105 171 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ACRV1P26436 265 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 AP1S2P56377 157 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 RFTN2Q52LD8 501 aaPredicted RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 SNAP47Q5SQN1 464 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 TERB1Q8NA31 727 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 CD200R1Q8TD46 325 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ARMC5Q96C12 935 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 TRMT61BQ9BVS5 477 aaKnown RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 NUAK2Q9H093 628 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 MARCH5Q9NX47 278 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ELOVL2Q9NXB9 296 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 GMPR2Q9P2T1 348 aaKnown RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 MAPRE3Q9UPY8 281 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 TTC3P53804 2025 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 SOCS5O75159 536 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 TULP3O75386 442 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 NADKO95544 446 aaPredicted RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 ATXN1LP0C7T5 689 aaKnown RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 SRCP12931 536 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 PAICSP22234 425 aaKnown RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 TTKP33981 857 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 PPP2R2DQ66LE6 453 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ERMP1Q7Z2K6 904 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 EPHX4Q8IUS5 362 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ZHX1-C8orf76Q96EF9 292 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 LMLNQ96KR4 655 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 SPACA7Q96KW9 195 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 CCM2Q9BSQ5 444 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 TRIT1Q9H3H1 467 aaKnown RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 DPEP2Q9H4A9 486 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 PCTPQ9UKL6 214 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 FBXL21Q9UKT6 434 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 CORO2BQ9UQ03 480 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 SLC9A8Q9Y2E8 581 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 EBLN1P0CF75 366 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ITGA2P17301 1181 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 FUT4P22083 530 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 FSHRP23945 695 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 IST1P53990 364 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ARF5P84085 180 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 TLR1Q15399 786 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 RFX4Q33E94 735 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 GTDC1Q4AE62 458 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 CRTC1Q6UUV9 634 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 PTCHD4Q6ZW05 846 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 CDK20Q8IZL9 346 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ZNF334Q9HCZ1 680 aaPredicted RBP14.61□□□□□ -0.07
CUX1-214ENST00000550008 ABCB10Q9NRK6 738 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 FZD4Q9ULV1 537 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ANKRD31Q8N7Z5 1873 aa14.61□□□□□ -0.07
CUX1-214ENST00000550008 ERN1O75460 977 aaKnown RBP14.6□□□□□ -0.07
CUX1-214ENST00000550008 SERPINB7O75635 380 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 ALPPL2P10696 532 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 ACTR1BP42025 376 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 KCNC1P48547 511 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 ACTR1AP61163 376 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 DAG1Q14118 895 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 MBTPS1Q14703 1052 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 SLC22A15Q8IZD6 547 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 CELF5Q8N6W0 485 aaKnown RBP14.6□□□□□ -0.07
CUX1-214ENST00000550008 TMEM145Q8NBT3 493 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 PEX13Q92968 403 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 MTERF3Q96E29 417 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 CEP44Q9C0F1 390 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 TMEM245Q9H330 911 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 CARS2Q9HA77 564 aaKnown RBP14.6□□□□□ -0.07
CUX1-214ENST00000550008 A0A1W2PRB8 838 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 DRGXA6NNA5 263 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 TMEM189-UBE2V1I3L0A0 370 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 PDYNP01213 254 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 KRT8P05787 483 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 EPCAMP16422 314 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 IL7RP16871 459 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 DGUOKQ16854 277 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 ZNF423Q2M1K9 1284 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 UAP1L1Q3KQV9 507 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 MAVSQ7Z434 540 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 LMNTD1Q8N9Z9 388 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 GPR26Q8NDV2 337 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 BRINP2Q9C0B6 783 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 MUC13Q9H3R2 512 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 XKR8Q9H6D3 395 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 ERVW-1Q9UQF0 538 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 GLOD5A6NK44 160 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 NME4O00746 187 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 BCKDHAP12694 445 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 FEN1P39748 380 aaKnown RBP14.6□□□□□ -0.07
CUX1-214ENST00000550008 PRAMEF14Q5SWL7 426 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 PRAMEF13Q5VWM6 474 aa14.6□□□□□ -0.07
CUX1-214ENST00000550008 EGFL6Q8IUX8 553 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms