RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 PTCHD4Q6ZW05 846 aa9.02□□□□□ -0.96
PPFIA2-216ENST00000549396 GIPC3Q8TF64 312 aa9.02□□□□□ -0.96
PPFIA2-216ENST00000549396 AUTS2Q8WXX7 1259 aa9.02□□□□□ -0.96
PPFIA2-216ENST00000549396 ACAT2Q9BWD1 397 aa9.02□□□□□ -0.96
PPFIA2-216ENST00000549396 S100A14Q9HCY8 104 aa9.02□□□□□ -0.96
PPFIA2-216ENST00000549396 COQ6Q9Y2Z9 468 aa9.02□□□□□ -0.96
PPFIA2-216ENST00000549396 IFT52Q9Y366 437 aa9.02□□□□□ -0.96
PPFIA2-216ENST00000549396 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 A8MT66 165 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 SCN2BO60939 215 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 RENP00797 406 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 UGT1A4P22310 534 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 ITGB7P26010 798 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 UGT1A3P35503 534 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CCR10P46092 362 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 SOX4Q06945 474 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 TMEM115Q12893 351 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 TRIM25Q14258 630 aaKnown RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 COQ5Q5HYK3 327 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 KIAA0319Q5VV43 1072 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 AGTRAPQ6RW13 159 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 ANKRD33Q7Z3H0 272 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 BBS10Q8TAM1 723 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 FAM84AQ96KN4 292 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 PIF1Q9H611 641 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CD320Q9NPF0 282 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 FLRT1Q9NZU1 646 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CLCA3PQ9Y6N3 262 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 KIAA0355O15063 1070 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CFHP08603 1231 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 ALAS2P22557 587 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 RPL5P46777 297 aaKnown RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 TMIGD1Q6UXZ0 262 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 TMCO2Q7Z6W1 182 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 ZNF671Q8TAW3 534 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 MAGEE2Q8TD90 523 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 ZNF689Q96CS4 500 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 MGME1Q9BQP7 344 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 G6PC3Q9BUM1 346 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CAPN5O15484 640 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 PROM1O43490 865 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 PRAMEF12O95522 483 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 HSMCR30P0CW71 290 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CDH1P12830 882 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 HMGCLP35914 325 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CYP4F2P78329 520 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 OGDHQ02218 1023 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 IL18R1Q13478 541 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CST6Q15828 149 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 RAB41Q5JT25 222 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 ARMC4Q5T2S8 1044 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 NRROSQ86YC3 692 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 CDADC1Q9BWV3 514 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 DKK3Q9UBP4 350 aa9.02□□□□□ -0.97
PPFIA2-216ENST00000549396 TCRBV21S2A2A0A5A6 115 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 CXCR6O00574 342 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 TP53I11O14683 189 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 PDCD5O14737 125 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 GSC2O15499 205 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 CLDN7O95471 211 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 CLCN7P51798 805 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 DSTNP60981 165 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 RTP2Q5QGT7 225 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 SNAP47Q5SQN1 464 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 RPL13AP3Q6NVV1 102 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 DPPA4Q7L190 304 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 PLXDC1Q8IUK5 500 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ARL10Q8N8L6 244 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 FAM46DQ8NEK8 389 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 LMX1AQ8TE12 382 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 CYB5D2Q8WUJ1 264 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 XAGE5Q8WWM1 108 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 CLIP3Q96DZ5 547 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 EBF3Q9H4W6 596 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ERVK-11Q9UQG0 969 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 LIPT1Q9Y234 373 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 MYADML2A6NDP7 307 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 MMP20O60882 483 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 IGFBP5P24593 272 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 IL12AP29459 219 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 NCBP2P52298 156 aaKnown RBP eCLIP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 PDX1P52945 283 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 RAB14P61106 215 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ARHGAP8P85298 464 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 TOR1AIP1Q5JTV8 583 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 ARHGAP36Q6ZRI8 547 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 CCDC80Q76M96 950 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 THAP5Q7Z6K1 395 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 RASGRP3Q8IV61 690 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 MRPL43Q8N983 215 aaKnown RBP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 FLCNQ8NFG4 579 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 SEC14L1Q92503 715 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 SIGLEC10Q96LC7 697 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 BMFQ96LC9 184 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 KLF16Q9BXK1 252 aaPredicted RBP9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 FBXW2Q9UKT8 454 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 LAMA4Q16363 1823 aa9.01□□□□□ -0.97
PPFIA2-216ENST00000549396 MAFKO60675 156 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms