RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 RMND5AQ9H871 391 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 TSC22D4Q9Y3Q8 395 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 PCDHGC4Q9Y5F7 938 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 HCFC2Q9Y5Z7 792 aa18.34■□□□□ 0.53
MSLN-202ENST00000545450 ELOVL7A1L3X0 281 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 OXSR1O95747 527 aaPredicted RBP18.33■□□□□ 0.52
MSLN-202ENST00000545450 NTRK1P04629 796 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 CAPN1P07384 714 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 FSHRP23945 695 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 CD70P32970 193 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 GRK3P35626 688 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 PLIN5Q00G26 463 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 CYP4F3Q08477 520 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 SHHQ15465 462 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 KCNJ8Q15842 424 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 PHKG1Q16816 387 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 PTPRNQ16849 979 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 PGS1Q32NB8 556 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 IL27RAQ6UWB1 636 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 CNIH3Q8TBE1 160 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 METTL6Q8TCB7 284 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 SLC13A3Q8WWT9 602 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 GTF2H4Q92759 462 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 SMIM14Q96QK8 99 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 DUSP21Q9H596 190 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 IKZF5Q9H5V7 419 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 MAGIXQ9H6Y5 334 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 CD274Q9NZQ7 290 aa18.33■□□□□ 0.52
MSLN-202ENST00000545450 SCHIP1Q9P0W5 487 aaPredicted RBP18.33■□□□□ 0.52
MSLN-202ENST00000545450 YBX2Q9Y2T7 364 aaKnown RBP18.33■□□□□ 0.52
MSLN-202ENST00000545450 CXCR6O00574 342 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 BCKDKO14874 412 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 PFDN6O15212 129 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 MAN1A2O60476 641 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 HNRNPA1P09651 372 aaKnown RBP eCLIP18.32■□□□□ 0.52
MSLN-202ENST00000545450 ITGAMP11215 1152 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 JUNDP17535 347 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 MSH3P20585 1137 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 PPP1R8Q12972 351 aaKnown RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 GPM6BQ13491 265 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 AP5B1Q2VPB7 878 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 RFTN2Q52LD8 501 aaPredicted RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 ARHGAP15Q53QZ3 475 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 AFTPHQ6ULP2 937 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 ARL10Q8N8L6 244 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 FIBINQ8TAL6 211 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 GLMNQ92990 594 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 REXO5Q96IC2 774 aaKnown RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 ZSWIM3Q96MP5 696 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 THUMPD3Q9BV44 507 aaKnown RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 KLHL25Q9H0H3 589 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 CERS4Q9HA82 394 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 TDP1Q9NUW8 608 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 DCAF13Q9NV06 445 aaKnown RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 ERVK-18Q9QC07 812 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 FBXO10Q9UK96 956 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 POLR3HQ9Y535 204 aaPredicted RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 PCDHGA10Q9Y5H3 936 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 SPO11Q9Y5K1 396 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 RAI2Q9Y5P3 530 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 ANKRD12Q6UB98 2062 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 C2orf16Q68DN1 1984 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 PRMT5O14744 637 aaPredicted RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 ANGPTL1O95841 491 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 RETP07949 1114 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 CD9P21926 228 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 VBP1P61758 197 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 RAPSNQ13702 412 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 PON2Q15165 354 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 NR6A1Q15406 480 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 PLA2G4EQ3MJ16 856 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 ATXN7L2Q5T6C5 722 aaPredicted RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 SYT6Q5T7P8 510 aaPredicted RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 DSG4Q86SJ6 1040 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 ADCK1Q86TW2 530 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 P2RY8Q86VZ1 359 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 EEF1AKMT1Q8WVE0 214 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 FAM162AQ96A26 154 aa18.32■□□□□ 0.52
MSLN-202ENST00000545450 ZNF707Q96C28 371 aaPredicted RBP18.32■□□□□ 0.52
MSLN-202ENST00000545450 TTC34A8MYJ7 566 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 SMAD6O43541 496 aaKnown RBP18.31■□□□□ 0.52
MSLN-202ENST00000545450 VPS26AO75436 327 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 MYO1DO94832 1006 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 NRIP1P48552 1158 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 IL2P60568 153 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 RHOAP61586 193 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 SLC35A2P78381 396 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 IL5RAQ01344 420 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 SELENBP1Q13228 472 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 NCEH1Q6PIU2 408 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 GPR149Q86SP6 731 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 HIPK1Q86Z02 1210 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 MSRB3Q8IXL7 192 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 CHPFQ8IZ52 775 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 SIDT2Q8NBJ9 832 aaKnown RBP18.31■□□□□ 0.52
MSLN-202ENST00000545450 ING5Q8WYH8 240 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 RMDN1Q96DB5 314 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 LINGO1Q96FE5 620 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 HBEGFQ99075 208 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 C2orf49Q9BVC5 232 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms