RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SYCE1LA8MT33 242 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 UBXN8O00124 270 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 HGSO14964 777 aaPredicted RBP13.14□□□□□ -0.31
SP140-213ENST00000543928 S100BP04271 92 aaPredicted RBP13.14□□□□□ -0.31
SP140-213ENST00000543928 RBP1P09455 135 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 KRT4P19013 534 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 CSTF2P33240 577 aaKnown RBP eCLIP13.14□□□□□ -0.31
SP140-213ENST00000543928 HNMTP50135 292 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 C18orf21Q32NC0 220 aaPredicted RBP13.14□□□□□ -0.31
SP140-213ENST00000543928 CDKL4Q5MAI5 379 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 THEMIS2Q5TEJ8 643 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 CROCCP2Q86T23 111 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 TRABD2AQ86V40 505 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 LCA5Q86VQ0 697 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 CARFQ8N187 725 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 AGBL5Q8NDL9 886 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 OR2L3Q8NG85 312 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 OR2A1Q8NGT9 310 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 OR56A3Q8NH54 315 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 KLHL6Q8WZ60 621 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 PYCR2Q96C36 320 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 RHBDF1Q96CC6 855 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 TRAPPC9Q96Q05 1148 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 CMKLR1Q99788 373 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 MIPEPQ99797 713 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 SCNM1Q9BWG6 230 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 WWOXQ9NZC7 414 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 NUDT4Q9NZJ9 180 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 AKAP7Q9P0M2 348 aaPredicted RBP13.14□□□□□ -0.31
SP140-213ENST00000543928 SEMA5BQ9P283 1151 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 XPR1Q9UBH6 696 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 TAC3Q9UHF0 121 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 PCDHB11Q9Y5F2 797 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 UQCRHLA0A096LP55 91 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 TK2O00142 265 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 RGS16O15492 202 aaPredicted RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 FKBP9O95302 570 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 ZBTB11O95625 1053 aaPredicted RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 UQCRHP07919 91 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 GSTA1P08263 222 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 MTHFD2P13995 350 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 ST6GAL1P15907 406 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 CCND1P24385 295 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 CMPK1P30085 196 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 ARL4DP49703 201 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 YBX1P67809 324 aaKnown RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 EIF3IQ13347 325 aaKnown RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 PTCHD3Q3KNS1 767 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 C3orf38Q5JPI3 329 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 PRAMEF13Q5VWM6 474 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 KIAA1614Q5VZ46 1190 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 ICE2Q659A1 982 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 SULT1C3Q6IMI6 304 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 CAPN13Q6MZZ7 669 aaPredicted RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 RAB11FIP2Q7L804 512 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 KMT5CQ86Y97 462 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 SRRM1Q8IYB3 904 aaKnown RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 C4orf33Q8N1A6 199 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 TCAIMQ8N3R3 496 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 PDPRQ8NCN5 879 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 SLC41A2Q96JW4 573 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 MRPL57Q9BQC6 102 aaKnown RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 SGPP1Q9BX95 441 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 MRPL46Q9H2W6 279 aaKnown RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 INTS7Q9NVH2 962 aaKnown RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 SOHLH2Q9NX45 425 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 TMEM216Q9P0N5 145 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 CPSF2Q9P2I0 782 aaKnown RBP13.13□□□□□ -0.31
SP140-213ENST00000543928 DCDC2Q9UHG0 476 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 KLHL20Q9Y2M5 609 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 LOXL2Q9Y4K0 774 aa13.13□□□□□ -0.31
SP140-213ENST00000543928 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
SP140-213ENST00000543928 MED19A0JLT2 244 aaPredicted RBP13.12□□□□□ -0.31
SP140-213ENST00000543928 PMS2P1A4D2B8 440 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 EFCAB7A8K855 629 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 COPEO14579 308 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 MAP2K7O14733 419 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 TAPBPO15533 448 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 PRAMEF10O60809 474 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 GLRA3O75311 464 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 CCNDBP1O95273 360 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 GFAPP14136 432 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 HGFP14210 728 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 NELFEP18615 380 aaKnown RBP13.12□□□□□ -0.31
SP140-213ENST00000543928 MAGP20916 626 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 GDF5P43026 501 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 SLC6A12P48065 614 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 CCT5P48643 541 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 HSD11B2P80365 405 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 SLC18A2Q05940 514 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 PRDX1Q06830 199 aaKnown RBP13.12□□□□□ -0.31
SP140-213ENST00000543928 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 FBXO48Q5FWF7 155 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 C16orf46Q6P387 395 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 FOXR1Q6PIV2 292 aa13.12□□□□□ -0.31
SP140-213ENST00000543928 CDHR3Q6ZTQ4 885 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms