RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 GGHQ92820 318 aa12.36□□□□□ -0.43
SMG8-202ENST00000543872 MYDGFQ969H8 173 aa12.36□□□□□ -0.43
SMG8-202ENST00000543872 CCDC115Q96NT0 180 aa12.36□□□□□ -0.43
SMG8-202ENST00000543872 TM9SF2Q99805 663 aa12.36□□□□□ -0.43
SMG8-202ENST00000543872 GDF15Q99988 308 aa12.36□□□□□ -0.43
SMG8-202ENST00000543872 SNTG1Q9NSN8 517 aa12.36□□□□□ -0.43
SMG8-202ENST00000543872 CCDC59Q9P031 241 aaKnown RBP12.36□□□□□ -0.43
SMG8-202ENST00000543872 TIMM13Q9Y5L4 95 aaPredicted RBP12.36□□□□□ -0.43
SMG8-202ENST00000543872 SOWAHBA6NEL2 793 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 CACNG3O60359 315 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 HBP1O60381 514 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 B3GALT4O96024 378 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 NUDT1P36639 197 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 RPL34P49207 117 aaKnown RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 HMGCS1Q01581 520 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 ALDH6A1Q02252 535 aaKnown RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 KDM4DQ6B0I6 523 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 SMYD5Q6GMV2 418 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 CHPFQ8IZ52 775 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 PCNPQ8WW12 178 aaKnown RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 APH1BQ8WW43 257 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 KIAA1191Q96A73 305 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 C17orf62Q9BQA9 187 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 NUSAP1Q9BXS6 441 aaKnown RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 SMURF1Q9HCE7 757 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 RAD18Q9NS91 495 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 C1orf109Q9NX04 203 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 SIRT5Q9NXA8 310 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 CACNG4Q9UBN1 327 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 PCTPQ9UKL6 214 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 SNX7Q9UNH6 387 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 PCDHGB2Q9Y5G2 931 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 EP400Q96L91 3159 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 PLK4O00444 970 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 SEC22BO75396 215 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 PGK2P07205 417 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 RAD51Q06609 339 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 SCAPQ12770 1279 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 TOR2AQ5JU69 321 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 FAM171A1Q5VUB5 890 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 PAQR9Q6ZVX9 377 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 GPR149Q86SP6 731 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 LAX1Q8IWV1 398 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 MSRB3Q8IXL7 192 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 NLGN1Q8N2Q7 840 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 HERVK_113Q902F9 699 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 FRMD6Q96NE9 622 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 GPR21Q99679 349 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 MFSD1Q9H3U5 465 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 I3L521 148 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 TSPAN4O14817 238 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 SHOXO15266 292 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 UGT2B17O75795 530 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 WISP3O95389 354 aaPredicted RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 RPS17P08708 135 aaKnown RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 POU3F3P20264 500 aaPredicted RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 ERP29P30040 261 aaKnown RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 SSTR4P31391 388 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 ST3GAL4Q11206 333 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 GALNT3Q14435 633 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 ZNF267Q14586 743 aaPredicted RBP12.35□□□□□ -0.43
SMG8-202ENST00000543872 TAF12Q16514 161 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 FAM131AQ6UXB0 335 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 GLCCI1Q86VQ1 547 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 NEUROG3Q9Y4Z2 214 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 HSPE1-MOB4S4R3N1 261 aa12.35□□□□□ -0.43
SMG8-202ENST00000543872 SMIM30A4D0T7 59 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 OR7A10O76100 309 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 C22orf31O95567 290 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 ADORA3P0DMS8 318 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 IGFBP6P24592 240 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 SCN1BQ07699 218 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 GNA13Q14344 377 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 ABRAXAS2Q15018 415 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 WSCD1Q658N2 575 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 MRNIPQ6NTE8 343 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 TAC4Q86UU9 113 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 OR4M1Q8NGD0 313 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 RHEBL1Q8TAI7 183 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 ZFAND1Q8TCF1 268 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 FUBP1Q96AE4 644 aaKnown RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 TPD52L3Q96J77 140 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 OR5M11Q96RB7 305 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 GFM1Q96RP9 751 aaKnown RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 MCCC1Q96RQ3 725 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 NXF3Q9H4D5 531 aaKnown RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 LRRC37AA6NMS7 1700 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 LEUTXA8MZ59 168 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 DNAJA1P31689 397 aaKnown RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 AP2S1P53680 142 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 FAM189BP81408 668 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 TARDBPQ13148 414 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMG8-202ENST00000543872 CAMK2GQ13555 558 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 SNX20Q7Z614 316 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 LRRC52Q8N7C0 313 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 ENKURQ8TC29 256 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 TTC9Q92623 222 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 SH3KBP1Q96B97 665 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms