RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ZCCHC7Q8N3Z6 543 aaKnown RBP6.37□□□□□ -1.39
PTPRO-208ENST00000542557 KREMEN2Q8NCW0 462 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 DDHD1Q8NEL9 900 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 OR2A12Q8NGT7 310 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 MCOLN3Q8TDD5 553 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 NELL1Q92832 810 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 FAM120BQ96EK7 910 aaKnown RBP6.37□□□□□ -1.39
PTPRO-208ENST00000542557 FRG2BQ96QU4 278 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 RBM4BQ9BQ04 359 aaKnown RBP6.37□□□□□ -1.39
PTPRO-208ENST00000542557 RBM4Q9BWF3 364 aaKnown RBP6.37□□□□□ -1.39
PTPRO-208ENST00000542557 ZNF700Q9H0M5 742 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 RNF208Q9H0X6 261 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 ZNHIT2Q9UHR6 403 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 PTPRSQ13332 1948 aa6.37□□□□□ -1.39
PTPRO-208ENST00000542557 SOBPA7XYQ1 873 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SGTAO43765 313 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SLCO2B1O94956 709 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CST1P01037 141 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CLTBP09497 229 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CDK4P11802 303 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 JUNBP17275 347 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 GJA1P17302 382 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PRPS1L1P21108 318 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 MAGEA2P43356 314 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 MAPK9P45984 424 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 TRPC1P48995 793 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PCDH1Q08174 1060 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 RTL10Q7L3V2 364 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 KIAA0907Q7Z7F0 614 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SERPINA11Q86U17 422 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 TMEM25Q86YD3 366 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 VRK3Q8IV63 474 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 TRAM1L1Q8N609 369 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CHST14Q8NCH0 376 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 OR5K1Q8NHB7 308 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CLHC1Q8NHS4 586 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ASZ1Q8WWH4 475 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 GAB3Q8WWW8 586 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 STARD8Q92502 1023 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 MUS81Q96NY9 551 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 YME1L1Q96TA2 773 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 P2RY13Q9BPV8 354 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CORO1BQ9BR76 489 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 IER2Q9BTL4 223 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CXorf21Q9HAI6 301 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 HPS4Q9NQG7 708 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 IFT80Q9P2H3 777 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PPT2Q9UMR5 302 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 BNIP3LO60238 219 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PRAMEF4O60810 478 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PSIP1O75475 530 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PRKD3O94806 890 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 LINC00271P0C7V0 271 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PCNAP12004 261 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 HSD3B1P14060 373 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SHMT2P34897 504 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CCR2P41597 374 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 KIR3DL1P43629 444 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 RECQLP46063 649 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 GABARAPL2P60520 117 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PFN3P60673 137 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 HPCAP84074 193 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SRSF11Q05519 484 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 GRSF1Q12849 480 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 DCTN2Q13561 401 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 RAB39AQ14964 217 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 RFX4Q33E94 735 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ZC3H12BQ5HYM0 836 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 HENMT1Q5T8I9 393 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PRAMEF9Q5VWM5 478 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 GCNT7Q6ZNI0 430 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 CYP2U1Q7Z449 544 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ARHGAP22Q7Z5H3 698 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 THAP5Q7Z6K1 395 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ADIPOR2Q86V24 386 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 PHACTR4Q8IZ21 702 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 C8orf59Q8N0T1 100 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 HCAR2Q8TDS4 363 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ATL1Q8WXF7 558 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 HDAC2Q92769 488 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 IRF7Q92985 503 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 NCLNQ969V3 563 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 MTFMTQ96DP5 389 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 APIPQ96GX9 242 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ASB16Q96NS5 453 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 TSSK3Q96PN8 268 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 VPS35Q96QK1 796 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 MBOAT4Q96T53 435 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 HEPHQ9BQS7 1158 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 TBCDQ9BTW9 1192 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ZSCAN5AQ9BUG6 496 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 GABARAPL1Q9H0R8 117 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SMG9Q9H0W8 520 aaKnown RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 ABCG8Q9H221 673 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 TOR3AQ9H497 397 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 FAM83DQ9H4H8 585 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SOX17Q9H6I2 414 aaPredicted RBP6.36□□□□□ -1.39
PTPRO-208ENST00000542557 POLR1BQ9H9Y6 1135 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 SLC6A13Q9NSD5 602 aa6.36□□□□□ -1.39
PTPRO-208ENST00000542557 MARK1Q9P0L2 795 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms