RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RAB8BQ92930 207 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 ISOC1Q96CN7 298 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 PCNTO95613 3336 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 TULP3O75386 442 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 APOL3O95236 402 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 SYN1P17600 705 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 FEN1P39748 380 aaKnown RBP15.69■□□□□ 0.1
VARS2-212ENST00000542001 PTPN5P54829 565 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 RPS3AP61247 264 aaKnown RBP15.69■□□□□ 0.1
VARS2-212ENST00000542001 VBP1P61758 197 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 SELPLGQ14242 412 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 RAB39AQ14964 217 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 TEAD2Q15562 447 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 MRPL10Q7Z7H8 261 aaKnown RBP15.69■□□□□ 0.1
VARS2-212ENST00000542001 P2RY8Q86VZ1 359 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 TMEM25Q86YD3 366 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 BTN2A2Q8WVV5 523 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 REPS1Q96D71 796 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 SEC14L3Q9UDX4 400 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 FBXW2Q9UKT8 454 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 TMCO1Q9UM00 188 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 CLEC4AQ9UMR7 237 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 DLEC1Q9Y238 1755 aa15.69■□□□□ 0.1
VARS2-212ENST00000542001 H3BNH8 94 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 OR1F1O43749 312 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 MMP20O60882 483 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 CSF2RAP15509 400 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 DDI2Q5TDH0 399 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 GDPD4Q6W3E5 623 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TPRG1Q6ZUI0 275 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 RTN4RL1Q86UN2 441 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 EPHX4Q8IUS5 362 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 PSD4Q8NDX1 1056 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 PIH1D2Q8WWB5 315 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 MAGEB10Q96LZ2 347 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 COPS4Q9BT78 406 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TMEM245Q9H330 911 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 POLE4Q9NR33 117 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 ITM2BQ9Y287 266 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 PHIPQ8WWQ0 1821 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 FAM25AB3EWG3 89 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 FAM25CB3EWG5 89 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 FAM25GB3EWG6 89 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TEX28O15482 410 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 PRAMEF12O95522 483 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 IMPDH2P12268 514 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 PTGER1P34995 402 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 RPS13P62277 151 aaKnown RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 C9orf64Q5T6V5 341 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 MED27Q6P2C8 311 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 AGTRAPQ6RW13 159 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 RSPO2Q6UXX9 243 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 GRASPQ7Z6J2 395 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 TMEM203Q969S6 136 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 ABHD8Q96I13 439 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 ZNF382Q96SR6 550 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 INPP5KQ9BT40 448 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 LINC00597Q9H2U6 94 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TPT1P8Q9HAU6 139 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 LOC100130705A0A1B0GUX0 176 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 RTCAO00442 366 aaKnown RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 TSPAN6O43657 245 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TSPAN19P0C672 248 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 RFC2P35250 354 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 ADRA1AP35348 466 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 DSC3Q14574 896 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 FUNDC1Q8IVP5 155 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 AMER2Q8N7J2 671 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 RHEBL1Q8TAI7 183 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 FAR1Q8WVX9 515 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 DPF3Q92784 378 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TRMT61BQ9BVS5 477 aaKnown RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 NAA50Q9GZZ1 169 aaKnown RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 PRSS21Q9Y6M0 314 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 RREB1Q92766 1687 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 SEC16AO15027 2179 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3DA0A087WVF3 549 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3IA0A087WXS9 549 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3EA0A087X179 549 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3KA0A087X1G2 549 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 PIPSLA2A3N6 862 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3FA6NER0 549 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3LB9A6J9 549 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 ENO2P09104 434 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3HP0C7X1 549 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 ATP1B2P14415 290 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 LAG3P18627 525 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 ATF6P18850 670 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 SLC26A3P40879 764 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 RNF144AP50876 292 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 MAPK12P53778 367 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 RPS26P62854 115 aaKnown RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 PMS2P3Q13401 168 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3GQ6DHY5 549 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3CQ6IPX1 549 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 TBC1D3Q8IZP1 549 aaPredicted RBP15.68■□□□□ 0.1
VARS2-212ENST00000542001 KRT78Q8N1N4 520 aa15.68■□□□□ 0.1
VARS2-212ENST00000542001 ATOH8Q96SQ7 321 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms