RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 VPS13AQ96RL7 3174 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 FAM234BA2RU67 622 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 KRT75O95678 551 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 LRG1P02750 347 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 MMP2P08253 660 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 RPS17P08708 135 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 DBTP11182 482 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 CD36P16671 472 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 TACR2P21452 398 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ARL1P40616 181 aaPredicted RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 HK3P52790 923 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 PHC1P78364 1004 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 MVKQ03426 396 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 PTGR1Q14914 329 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 TEAD2Q15562 447 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 FAM214AQ32MH5 1076 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 NXNL2Q5VZ03 156 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 PPP2R2DQ66LE6 453 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 CCBE1Q6UXH8 406 aaPredicted RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 RAB44Q7Z6P3 723 aaPredicted RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 GALNT10Q86SR1 603 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 PLD3Q8IV08 490 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 CCDC71Q8IV32 467 aaPredicted RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 BBS7Q8IWZ6 715 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ZNF548Q8NEK5 533 aaPredicted RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 OR2T12Q8NG77 320 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 CALML6Q8TD86 181 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ADAMTS19Q8TE59 1207 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ZFYVE19Q96K21 471 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 RBM4BQ9BQ04 359 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 RBM4Q9BWF3 364 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 PBX4Q9BYU1 374 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 PRKD2Q9BZL6 878 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 DNMT3LQ9UJW3 386 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 SNX6Q9UNH7 406 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 N6AMT1Q9Y5N5 214 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ALPK3Q96L96 1907 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ATG2BQ96BY7 2078 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 UBA6A0AVT1 1052 aaPredicted RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 PABPN1LA6NDY0 278 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 NOTOA8MTQ0 251 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 A8MX80 341 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 EFCAB9A8MZ26 197 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 CBX4O00257 560 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 EIF3FO00303 357 aaPredicted RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 RGS13O14921 159 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 RAD51BO15315 384 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 LDB2O43679 373 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 PGLSO95336 258 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 PEX11BO96011 259 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 SLC2A3P11169 496 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 SERPINB10P48595 397 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 EPHB3P54753 998 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ERVK-8P63133 956 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ACOX1Q15067 660 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 CARD16Q5EG05 197 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 SIRPB2Q5JXA9 342 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 SYT6Q5T7P8 510 aaPredicted RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 SPATA19Q7Z5L4 167 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 CCDC103Q8IW40 242 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 CARNMT1Q8N4J0 409 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 MRPL43Q8N983 215 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 BLOC1S5Q8TDH9 187 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 FAM162AQ96A26 154 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ZHX1-C8orf76Q96EF9 292 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 REXO5Q96IC2 774 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 ZNF599Q96NL3 588 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 CDK5RAP1Q96SZ6 601 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 THUMPD3Q9BV44 507 aaKnown RBP8.91□□□□□ -0.98
THBS3-211ENST00000541990 NKX2-4Q9H2Z4 354 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 MFSD1Q9H3U5 465 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 SP140LQ9H930 580 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 SP110Q9HB58 689 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ACOT13Q9NPJ3 140 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 ADPRHL2Q9NX46 363 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 SLC25A37Q9NYZ2 338 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 USE1Q9NZ43 259 aa8.91□□□□□ -0.98
THBS3-211ENST00000541990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.91□□□□□ -0.98
THBS3-211ENST00000541990 SDK1Q7Z5N4 2213 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 METTL15A6NJ78 407 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 DSCR3O14972 297 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 GSTA4O15217 222 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 IDH3BO43837 385 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 CCNKO75909 580 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 MFN2O95140 757 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 F11P03951 625 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 GSNP06396 782 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 CCDC159P0C7I6 412 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 ZDHHC11BP0C7U3 371 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 ALOX12P18054 663 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 KRT20P35900 424 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 RGRP47804 291 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 PIK3CGP48736 1102 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 AIF1P55008 147 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 ERVPABLB-1P60509 514 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 PRKG2Q13237 762 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 GALNT3Q14435 633 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 VEPH1Q14D04 833 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 PON2Q15165 354 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 MANEALQ5VSG8 457 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms